Analysis of interatomic Contacts of Structural Units in PDB entry:
6SR8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SR8 entry

There are 2 chains in PDB entry 6SR8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2ASP 236
B
 PRO 2ALA 235
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6SR8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 26Right-handed alpha
Helix 2
AA2
A
45 50Right-handed alpha
Helix 3
AA3
A
80 92Right-handed alpha
Helix 4
AA4
A
93 96Right-handed 310
Helix 5
AA5
A
101 118Right-handed alpha
Helix 6
AA6
A
118 128Right-handed alpha
Helix 7
AA7
A
132 147Right-handed alpha
Helix 8
AA8
A
158 177Right-handed alpha
Helix 9
AA9
A
185 196Right-handed alpha
Helix 10
AB1
A
201 214Right-handed alpha
Helix 11
AB2
A
214 220Right-handed alpha
Helix 12
AB3
A
222 236Right-handed alpha
Helix 13
AB4
B
13 26Right-handed alpha
Helix 14
AB5
B
45 50Right-handed alpha
Helix 15
AB6
B
80 92Right-handed alpha
Helix 16
AB7
B
93 96Right-handed 310
Helix 17
AB8
B
101 118Right-handed alpha
Helix 18
AB9
B
118 128Right-handed alpha
Helix 19
AC1
B
132 146Right-handed alpha
Helix 20
AC2
B
158 177Right-handed alpha
Helix 21
AC3
B
189 196Right-handed alpha
Helix 22
AC4
B
201 214Right-handed alpha
Helix 23
AC5
B
214 220Right-handed alpha
Helix 24
AC6
B
222 235Right-handed alpha
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There are 2 sheets in PDB entry 6SR8. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 36first strand
Strand 2
A
5 9parallel
Strand 3
A
58 61anti-parallel
Strand 4
A
76 79anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 36first strand
Strand 2
B
5 9parallel
Strand 3
B
58 61anti-parallel
Strand 4
B
76 79anti-parallel
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