Analysis of interatomic Contacts of Structural Units in PDB entry:
6SSM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SSM entry

There are 3 chains in PDB entry 6SSM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1GLY 236
C
 PRO 1GLY 236
B
 PRO 1GLY 236
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 6SSM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 44Right-handed alpha
Helix 2
AA2
A
47 60Right-handed alpha
Helix 3
AA3
A
64 74Right-handed alpha
Helix 4
AA4
A
77 101Right-handed alpha
Helix 5
AA5
A
110 115Right-handed alpha
Helix 6
AA6
A
124 129Right-handed 310
Helix 7
AA7
A
130 147Right-handed alpha
Helix 8
AA8
A
157 161Right-handed 310
Helix 9
AA9
A
168 179Right-handed alpha
Helix 10
AB1
A
180 182Right-handed 310
Helix 11
AB2
A
186 202Right-handed alpha
Helix 12
AB3
A
203 208Right-handed alpha
Helix 13
AB4
A
209 211Right-handed 310
Helix 14
AB5
A
222 229Right-handed alpha
Helix 15
AB6
C
29 44Right-handed alpha
Helix 16
AB7
C
47 61Right-handed alpha
Helix 17
AB8
C
64 74Right-handed alpha
Helix 18
AB9
C
77 101Right-handed alpha
Helix 19
AC1
C
109 115Right-handed alpha
Helix 20
AC2
C
122 127Right-handed alpha
Helix 21
AC3
C
130 146Right-handed alpha
Helix 22
AC4
C
169 183Right-handed alpha
Helix 23
AC5
C
188 193Right-handed alpha
Helix 24
AC6
C
193 199Right-handed alpha
Helix 25
AC7
C
203 211Right-handed alpha
Helix 26
AC8
C
222 231Right-handed alpha
Helix 27
AC9
B
30 43Right-handed alpha
Helix 28
AD1
B
47 61Right-handed alpha
Helix 29
AD2
B
64 74Right-handed alpha
Helix 30
AD3
B
77 101Right-handed alpha
Helix 31
AD4
B
109 115Right-handed alpha
Helix 32
AD5
B
122 127Right-handed alpha
Helix 33
AD6
B
130 147Right-handed alpha
Helix 34
AD7
B
173 184Right-handed alpha
Helix 35
AD8
B
186 194Right-handed alpha
Helix 36
AD9
B
194 199Right-handed alpha
Helix 37
AE1
B
203 211Right-handed alpha
Helix 38
AE2
B
212 214Right-handed 310
Helix 39
AE3
B
222 231Right-handed alpha
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There are no sheets in PDB entry 6SSM
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