Analysis of interatomic Contacts of Structural Units in PDB entry:
6STL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6STL entry

There are 2 chains in PDB entry 6STL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 22VAL 319
B
 VAL 23VAL 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 6STL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 42Right-handed alpha
Helix 2
AA2
A
43 50Right-handed alpha
Helix 3
AA3
A
60 70Right-handed alpha
Helix 4
AA4
A
80 89Right-handed alpha
Helix 5
AA5
A
116 121Right-handed 310
Helix 6
AA6
A
131 144Right-handed alpha
Helix 7
AA7
A
147 151Right-handed 310
Helix 8
AA8
A
157 167Right-handed alpha
Helix 9
AA9
A
178 185Right-handed alpha
Helix 10
AB1
A
193 199Right-handed alpha
Helix 11
AB2
A
211 217Right-handed alpha
Helix 12
AB3
A
217 238Right-handed alpha
Helix 13
AB4
A
238 244Right-handed alpha
Helix 14
AB5
A
245 257Right-handed alpha
Helix 15
AB6
A
259 261Right-handed 310
Helix 16
AB7
A
262 268Right-handed alpha
Helix 17
AB8
A
274 283Right-handed alpha
Helix 18
AB9
A
284 300Right-handed alpha
Helix 19
AC1
A
310 314Right-handed 310
Helix 20
AC2
B
35 42Right-handed alpha
Helix 21
AC3
B
43 50Right-handed alpha
Helix 22
AC4
B
60 70Right-handed alpha
Helix 23
AC5
B
80 89Right-handed alpha
Helix 24
AC6
B
116 121Right-handed 310
Helix 25
AC7
B
131 144Right-handed alpha
Helix 26
AC8
B
147 151Right-handed 310
Helix 27
AC9
B
157 167Right-handed alpha
Helix 28
AD1
B
178 185Right-handed alpha
Helix 29
AD2
B
193 199Right-handed alpha
Helix 30
AD3
B
211 217Right-handed alpha
Helix 31
AD4
B
217 238Right-handed alpha
Helix 32
AD5
B
238 243Right-handed alpha
Helix 33
AD6
B
245 257Right-handed alpha
Helix 34
AD7
B
259 261Right-handed 310
Helix 35
AD8
B
262 268Right-handed alpha
Helix 36
AD9
B
274 283Right-handed alpha
Helix 37
AE1
B
284 300Right-handed alpha
Helix 38
AE2
B
310 314Right-handed 310
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There are 4 sheets in PDB entry 6STL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 57first strand
Strand 2
A
24 29parallel
Strand 3
A
75 79parallel
Strand 4
A
204 210anti-parallel
Strand 5
A
93 102anti-parallel
Strand 6
A
270 271anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 155first strand
Strand 2
A
124 127parallel
Strand 3
A
172 175parallel
Strand 4
A
107 110anti-parallel
Strand 5
A
188 192anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 57first strand
Strand 2
B
24 29parallel
Strand 3
B
75 79parallel
Strand 4
B
204 210anti-parallel
Strand 5
B
93 102anti-parallel
Strand 6
B
270 271anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 155first strand
Strand 2
B
124 127parallel
Strand 3
B
172 175parallel
Strand 4
B
107 110anti-parallel
Strand 5
B
188 192anti-parallel
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