Analysis of interatomic Contacts of Structural Units in PDB entry:
6STT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6STT entry

There are 2 chains in PDB entry 6STT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 187GLU 371
B
 LEU 187GLU 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6STT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
267 271Right-handed 310
Helix 2
AA2
A
287 291Right-handed 310
Helix 3
AA3
A
308 310Right-handed 310
Helix 4
AA4
B
267 271Right-handed 310
Helix 5
AA5
B
287 291Right-handed 310
Helix 6
AA6
B
308 310Right-handed 310
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There are 6 sheets in PDB entry 6STT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 273first strand
Strand 2
A
188 190anti-parallel
Strand 3
A
207 216anti-parallel
Strand 4
A
219 228anti-parallel
Strand 5
A
363 368anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 236first strand
Strand 2
A
356 357anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 254first strand
Strand 2
A
341 348anti-parallel
Strand 3
A
326 333anti-parallel
Strand 4
A
312 318anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
272 273first strand
Strand 2
B
188 190anti-parallel
Strand 3
B
207 216anti-parallel
Strand 4
B
219 228anti-parallel
Strand 5
B
363 368anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
235 236first strand
Strand 2
B
356 357anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 254first strand
Strand 2
B
341 348anti-parallel
Strand 3
B
326 333anti-parallel
Strand 4
B
312 318anti-parallel
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