Analysis of interatomic Contacts of Structural Units in PDB entry:
6SU2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6SU2 entry

There are 4 chains in PDB entry 6SU2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	ARG 499
B	SER 2	ASN 501
C	SER 2	VAL 498
D	SER 2	ARG 499

There are 85 helices in PDB entry 6SU2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	8	Right-handed alpha
Helix 2	AA2	A	29	33	Right-handed 310
Helix 3	AA3	A	34	45	Right-handed alpha
Helix 4	AA4	A	57	76	Right-handed alpha
Helix 5	AA5	A	95	99	Right-handed 310
Helix 6	AA6	A	113	117	Right-handed 310
Helix 7	AA7	A	131	136	Right-handed alpha
Helix 8	AA8	A	191	205	Right-handed alpha
Helix 9	AA9	A	216	228	Right-handed alpha
Helix 10	AB1	A	242	248	Right-handed alpha
Helix 11	AB2	A	248	256	Right-handed alpha
Helix 12	AB3	A	262	270	Right-handed alpha
Helix 13	AB4	A	273	290	Right-handed alpha
Helix 14	AB5	A	300	305	Right-handed 310
Helix 15	AB6	A	310	324	Right-handed alpha
Helix 16	AB7	A	339	357	Right-handed alpha
Helix 17	AB8	A	359	370	Right-handed alpha
Helix 18	AB9	A	376	392	Right-handed alpha
Helix 19	AC1	A	404	412	Right-handed alpha
Helix 20	AC2	A	425	432	Right-handed alpha
Helix 21	AC3	A	444	449	Right-handed alpha
Helix 22	AC4	A	455	468	Right-handed alpha
Helix 23	AC5	B	3	8	Right-handed alpha
Helix 24	AC6	B	29	33	Right-handed 310
Helix 25	AC7	B	34	45	Right-handed alpha
Helix 26	AC8	B	57	76	Right-handed alpha
Helix 27	AC9	B	131	136	Right-handed alpha
Helix 28	AD1	B	191	205	Right-handed alpha
Helix 29	AD2	B	216	228	Right-handed alpha
Helix 30	AD3	B	242	248	Right-handed alpha
Helix 31	AD4	B	248	256	Right-handed alpha
Helix 32	AD5	B	262	270	Right-handed alpha
Helix 33	AD6	B	273	290	Right-handed alpha
Helix 34	AD7	B	300	305	Right-handed 310
Helix 35	AD8	B	310	324	Right-handed alpha
Helix 36	AD9	B	339	357	Right-handed alpha
Helix 37	AE1	B	359	370	Right-handed alpha
Helix 38	AE2	B	376	392	Right-handed alpha
Helix 39	AE3	B	404	412	Right-handed alpha
Helix 40	AE4	B	425	432	Right-handed alpha
Helix 41	AE5	B	433	435	Right-handed 310
Helix 42	AE6	B	444	449	Right-handed alpha
Helix 43	AE7	B	455	468	Right-handed alpha
Helix 44	AE8	C	3	8	Right-handed alpha
Helix 45	AE9	C	29	33	Right-handed 310
Helix 46	AF1	C	34	45	Right-handed alpha
Helix 47	AF2	C	59	76	Right-handed alpha
Helix 48	AF3	C	113	117	Right-handed 310
Helix 49	AF4	C	131	136	Right-handed alpha
Helix 50	AF5	C	191	205	Right-handed alpha
Helix 51	AF6	C	216	228	Right-handed alpha
Helix 52	AF7	C	242	248	Right-handed alpha
Helix 53	AF8	C	248	256	Right-handed alpha
Helix 54	AF9	C	262	270	Right-handed alpha
Helix 55	AG1	C	273	290	Right-handed alpha
Helix 56	AG2	C	300	305	Right-handed 310
Helix 57	AG3	C	310	324	Right-handed alpha
Helix 58	AG4	C	339	357	Right-handed alpha
Helix 59	AG5	C	360	370	Right-handed alpha
Helix 60	AG6	C	376	392	Right-handed alpha
Helix 61	AG7	C	404	412	Right-handed alpha
Helix 62	AG8	C	425	432	Right-handed alpha
Helix 63	AG9	C	444	449	Right-handed alpha
Helix 64	AH1	C	455	468	Right-handed alpha
Helix 65	AH2	D	3	8	Right-handed alpha
Helix 66	AH3	D	29	33	Right-handed 310
Helix 67	AH4	D	34	45	Right-handed alpha
Helix 68	AH5	D	57	76	Right-handed alpha
Helix 69	AH6	D	113	117	Right-handed 310
Helix 70	AH7	D	131	136	Right-handed alpha
Helix 71	AH8	D	191	204	Right-handed alpha
Helix 72	AH9	D	216	228	Right-handed alpha
Helix 73	AI1	D	242	248	Right-handed alpha
Helix 74	AI2	D	248	256	Right-handed alpha
Helix 75	AI3	D	262	270	Right-handed alpha
Helix 76	AI4	D	273	290	Right-handed alpha
Helix 77	AI5	D	300	305	Right-handed 310
Helix 78	AI6	D	310	324	Right-handed alpha
Helix 79	AI7	D	339	357	Right-handed alpha
Helix 80	AI8	D	359	370	Right-handed alpha
Helix 81	AI9	D	376	392	Right-handed alpha
Helix 82	AJ1	D	404	412	Right-handed alpha
Helix 83	AJ2	D	425	432	Right-handed alpha
Helix 84	AJ3	D	444	449	Right-handed alpha
Helix 85	AJ4	D	455	468	Right-handed alpha

There are 14 sheets in PDB entry 6SU2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	27	first strand
Strand 2	A	46	52	parallel
Strand 3	A	80	84	parallel
Strand 4	A	208	211	parallel
Strand 5	A	235	240	parallel
Strand 6	A	258	261	parallel
Strand 7	A	293	295	parallel
Strand 8	A	327	330	parallel
Strand 9	A	23	27	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	100	102	first strand
Strand 2	A	170	172	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	124	126	first strand
Strand 2	A	107	111	parallel
Strand 3	A	161	166	anti-parallel
Strand 4	A	149	155	anti-parallel
Strand 5	A	141	144	anti-parallel
Strand 6	A	178	179	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	438	442	first strand
Strand 2	A	419	423	parallel
Strand 3	A	396	399	parallel
Strand 4	A	476	481	parallel
Strand 5	A	492	497	anti-parallel
Strand 6	D	492	497	anti-parallel
Strand 7	D	476	481	anti-parallel
Strand 8	D	396	400	parallel
Strand 9	D	419	423	parallel
Strand 10	D	438	442	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	293	295	first strand
Strand 2	B	258	261	parallel
Strand 3	B	235	240	parallel
Strand 4	B	208	211	parallel
Strand 5	B	80	84	parallel
Strand 6	B	46	52	parallel
Strand 7	B	23	27	parallel
Strand 8	B	327	330	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	102	first strand
Strand 2	B	170	172	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	107	111	first strand
Strand 2	B	161	166	anti-parallel
Strand 3	B	149	155	anti-parallel
Strand 4	B	141	144	anti-parallel
Strand 5	B	178	179	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	438	442	first strand
Strand 2	B	419	423	parallel
Strand 3	B	396	400	parallel
Strand 4	B	476	481	parallel
Strand 5	B	492	497	anti-parallel
Strand 6	C	492	497	anti-parallel
Strand 7	C	476	481	anti-parallel
Strand 8	C	396	399	parallel
Strand 9	C	419	423	parallel
Strand 10	C	438	442	parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	23	27	first strand
Strand 2	C	46	52	parallel
Strand 3	C	80	84	parallel
Strand 4	C	208	211	parallel
Strand 5	C	235	240	parallel
Strand 6	C	258	261	parallel
Strand 7	C	293	295	parallel
Strand 8	C	327	330	parallel
Strand 9	C	23	27	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	100	101	first strand
Strand 2	C	171	172	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	124	126	first strand
Strand 2	C	107	111	parallel
Strand 3	C	162	166	anti-parallel
Strand 4	C	149	156	anti-parallel
Strand 5	C	141	144	anti-parallel
Strand 6	C	178	179	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	23	27	first strand
Strand 2	D	46	52	parallel
Strand 3	D	80	84	parallel
Strand 4	D	208	211	parallel
Strand 5	D	235	240	parallel
Strand 6	D	258	261	parallel
Strand 7	D	293	295	parallel
Strand 8	D	327	330	parallel
Strand 9	D	23	27	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	100	102	first strand
Strand 2	D	170	172	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	124	126	first strand
Strand 2	D	107	111	parallel
Strand 3	D	161	166	anti-parallel
Strand 4	D	149	155	anti-parallel
Strand 5	D	141	144	anti-parallel
Strand 6	D	178	179	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6SU2

Analysis of interatomic Contacts of Structural Units in PDB entry:
6SU2