Analysis of interatomic Contacts of Structural Units in PDB entry:
6SU9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SU9 entry

There are 2 chains in PDB entry 6SU9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 496
B
 MET 1PHE 496
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6SU9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 30Right-handed alpha
Helix 2
AA2
A
54 68Right-handed alpha
Helix 3
AA3
A
86 103Right-handed alpha
Helix 4
AA4
A
304 309Right-handed alpha
Helix 5
AA5
A
331 341Right-handed alpha
Helix 6
AA6
A
342 344Right-handed 310
Helix 7
AA7
A
350 359Right-handed alpha
Helix 8
AA8
A
364 378Right-handed alpha
Helix 9
AA9
A
426 441Right-handed alpha
Helix 10
AB1
A
445 463Right-handed alpha
Helix 11
AB2
A
475 480Right-handed alpha
Helix 12
AB3
B
19 30Right-handed alpha
Helix 13
AB4
B
54 70Right-handed alpha
Helix 14
AB5
B
86 104Right-handed alpha
Helix 15
AB6
B
304 309Right-handed alpha
Helix 16
AB7
B
330 342Right-handed alpha
Helix 17
AB8
B
350 359Right-handed alpha
Helix 18
AB9
B
364 378Right-handed alpha
Helix 19
AC1
B
426 442Right-handed alpha
Helix 20
AC2
B
445 462Right-handed alpha
Helix 21
AC3
B
475 480Right-handed alpha
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There are 4 sheets in PDB entry 6SU9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 52first strand
Strand 2
A
35 44anti-parallel
Strand 3
A
3 13parallel
Strand 4
A
75 81parallel
Strand 5
A
313 317parallel
Strand 6
A
346 347parallel
Strand 7
A
382 388parallel
Strand 8
A
396 404anti-parallel
Strand 9
A
410 418anti-parallel
Strand 10
A
492 494anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 323first strand
Strand 2
A
326 327anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 52first strand
Strand 2
B
35 44anti-parallel
Strand 3
B
3 15parallel
Strand 4
B
75 81parallel
Strand 5
B
313 317parallel
Strand 6
B
346 347parallel
Strand 7
B
382 390parallel
Strand 8
B
393 404anti-parallel
Strand 9
B
410 418anti-parallel
Strand 10
B
493 495anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
322 323first strand
Strand 2
B
326 327anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il