Analysis of interatomic Contacts of Structural Units in PDB entry:
6SUN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SUN entry

There is 1 chain in PDB entry 6SUN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6SUN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 9Right-handed alpha
Helix 2
AA2
A
10 23Right-handed alpha
Helix 3
AA3
A
25 29Right-handed 310
Helix 4
AA4
A
61 78Right-handed alpha
Helix 5
AA5
A
119 123Right-handed 310
Helix 6
AA6
A
124 143Right-handed alpha
Helix 7
AA7
A
149 153Right-handed 310
Helix 8
AA8
A
156 168Right-handed 310
Helix 9
AA9
A
173 188Right-handed alpha
Helix 10
AB1
A
229 243Right-handed alpha
Helix 11
AB2
A
250 268Right-handed alpha
Helix 12
AB3
A
273 278Right-handed 310
Helix 13
AB4
A
279 299Right-handed alpha
Helix 14
AB5
A
305 322Right-handed alpha
Helix 15
AB6
A
329 334Right-handed 310
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There are 4 sheets in PDB entry 6SUN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 33first strand
Strand 2
A
38 43anti-parallel
Strand 3
A
49 56anti-parallel
Strand 4
A
104 111anti-parallel
Strand 5
A
85 86anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 33first strand
Strand 2
A
38 43anti-parallel
Strand 3
A
49 56anti-parallel
Strand 4
A
104 111anti-parallel
Strand 5
A
95 98anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 200first strand
Strand 2
A
225 228anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 212first strand
Strand 2
A
215 218anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il