Analysis of interatomic Contacts of Structural Units in PDB entry:
6SUS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SUS entry

There is 1 chain in PDB entry 6SUS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ILE 1410MET 1675
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 6SUS. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
1616 1618Right-handed 310
Helix 2
AA2
A
1648 1652Right-handed 310
Helix 3
AA3
A
1665 1675Right-handed alpha
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There are 2 sheets in PDB entry 6SUS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 14 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1418 1420first strand
Strand 2
A
1436 1438parallel
Strand 3
A
1454 1456parallel
Strand 4
A
1474 1476parallel
Strand 5
A
1514 1522parallel
Strand 6
A
1508 1511anti-parallel
Strand 7
A
1500 1503anti-parallel
Strand 8
A
1535 1537parallel
Strand 9
A
1553 1555parallel
Strand 10
A
1571 1573parallel
Strand 11
A
1589 1592parallel
Strand 12
A
1610 1613parallel
Strand 13
A
1655 1658parallel
Strand 14
A
1661 1664anti-parallel
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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1427 1429first strand
Strand 2
A
1445 1447parallel
Strand 3
A
1463 1465parallel
Strand 4
A
1483 1485parallel
Strand 5
A
1526 1528parallel
Strand 6
A
1544 1546parallel
Strand 7
A
1562 1564parallel
Strand 8
A
1580 1584parallel
Strand 9
A
1598 1603parallel
Strand 10
A
1639 1642parallel
Strand 11
A
1628 1633anti-parallel
Strand 12
A
1620 1625anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il