Analysis of interatomic Contacts of Structural Units in PDB entry:
6SWX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SWX entry

There is 1 chain in PDB entry 6SWX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 205PRO 736
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6SWX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
225 245Right-handed alpha
Helix 2
AA2
A
259 269Right-handed alpha
Helix 3
AA3
A
272 291Right-handed alpha
Helix 4
AA4
A
303 320Right-handed alpha
Helix 5
AA5
A
341 343Right-handed 310
Helix 6
AA6
A
378 380Right-handed 310
Helix 7
AA7
A
381 392Right-handed alpha
Helix 8
AA8
A
398 411Right-handed alpha
Helix 9
AA9
A
441 448Right-handed alpha
Helix 10
AB1
A
448 455Right-handed alpha
Helix 11
AB2
A
487 493Right-handed alpha
Helix 12
AB3
A
493 502Right-handed alpha
Helix 13
AB4
A
532 541Right-handed alpha
Helix 14
AB5
A
541 553Right-handed alpha
Helix 15
AB6
A
562 573Right-handed alpha
Helix 16
AB7
A
577 587Right-handed alpha
Helix 17
AB8
A
603 626Right-handed alpha
Helix 18
AB9
A
628 651Right-handed alpha
Helix 19
AC1
A
651 656Right-handed alpha
Helix 20
AC2
A
659 682Right-handed alpha
Helix 21
AC3
A
685 697Right-handed alpha
Helix 22
AC4
A
699 703Right-handed 310
Helix 23
AC5
A
705 709Right-handed 310
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There are 7 sheets in PDB entry 6SWX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 219first strand
Strand 2
A
249 256parallel
Strand 3
A
297 300parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 219first strand
Strand 2
A
249 256parallel
Strand 3
A
211 214parallel
Strand 4
A
480 484parallel
Strand 5
A
510 513parallel
Strand 6
A
396 397parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
338 340first strand
Strand 2
A
323 333anti-parallel
Strand 3
A
367 376anti-parallel
Strand 4
A
416 417anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 349first strand
Strand 2
A
355 359anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 421first strand
Strand 2
A
438 440anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
456 458first strand
Strand 2
A
464 466anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
517 518first strand
Strand 2
A
560 561parallel
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