Analysis of interatomic Contacts of Structural Units in PDB entry:
6SWY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SWY entry

There are 5 chains in PDB entry 6SWY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
5
 ALA 4LYS 919
8
 PHE 27ASN 455
1
 MET 5UNK 3909
4
 ARG 91ALA 362
9
 SER 223UNK 3302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 96 helices in PDB entry 6SWY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
5
6 18Right-handed alpha
Helix 2
AA2
5
20 27Right-handed alpha
Helix 3
AA3
5
28 33Right-handed 310
Helix 4
AA4
5
34 40Right-handed alpha
Helix 5
AA5
5
47 62Right-handed alpha
Helix 6
AA6
5
65 73Right-handed alpha
Helix 7
AA7
5
74 86Right-handed alpha
Helix 8
AA8
5
97 115Right-handed alpha
Helix 9
AA9
5
122 137Right-handed alpha
Helix 10
AB1
5
144 160Right-handed alpha
Helix 11
AB2
5
182 205Right-handed alpha
Helix 12
AB3
5
206 211Right-handed 310
Helix 13
AB4
5
254 272Right-handed alpha
Helix 14
AB5
5
273 275Right-handed 310
Helix 15
AB6
5
285 295Right-handed alpha
Helix 16
AB7
5
299 317Right-handed alpha
Helix 17
AB8
5
319 322Right-handed 310
Helix 18
AB9
5
323 337Right-handed alpha
Helix 19
AC1
5
348 364Right-handed alpha
Helix 20
AC2
5
368 377Right-handed alpha
Helix 21
AC3
5
378 392Right-handed alpha
Helix 22
AC4
5
397 416Right-handed alpha
Helix 23
AC5
5
418 427Right-handed alpha
Helix 24
AC6
5
430 461Right-handed alpha
Helix 25
AC7
5
473 488Right-handed alpha
Helix 26
AC8
5
490 496Right-handed alpha
Helix 27
AC9
5
500 521Right-handed alpha
Helix 28
AD1
5
522 525Right-handed 310
Helix 29
AD2
5
529 547Right-handed alpha
Helix 30
AD3
5
553 560Right-handed alpha
Helix 31
AD4
5
561 571Right-handed alpha
Helix 32
AD5
5
585 593Right-handed alpha
Helix 33
AD6
5
598 612Right-handed alpha
Helix 34
AD7
5
616 627Right-handed alpha
Helix 35
AD8
5
628 634Right-handed alpha
Helix 36
AD9
5
640 656Right-handed alpha
Helix 37
AE1
5
658 668Right-handed alpha
Helix 38
AE2
5
690 702Right-handed alpha
Helix 39
AE3
5
706 725Right-handed alpha
Helix 40
AE4
5
727 737Right-handed alpha
Helix 41
AE5
5
738 749Right-handed alpha
Helix 42
AE6
5
761 777Right-handed alpha
Helix 43
AE7
5
874 886Right-handed alpha
Helix 44
AE8
5
887 895Right-handed alpha
Helix 45
AE9
5
896 898Right-handed 310
Helix 46
AF1
5
900 918Right-handed alpha
Helix 47
AF2
8
35 53Right-handed alpha
Helix 48
AF3
8
88 100Right-handed alpha
Helix 49
AF4
8
102 114Right-handed alpha
Helix 50
AF5
8
118 130Right-handed alpha
Helix 51
AF6
8
130 143Right-handed alpha
Helix 52
AF7
8
145 157Right-handed alpha
Helix 53
AF8
8
193 211Right-handed alpha
Helix 54
AF9
8
220 234Right-handed alpha
Helix 55
AG1
8
234 240Right-handed alpha
Helix 56
AG2
8
242 257Right-handed alpha
Helix 57
AG3
8
273 278Right-handed alpha
Helix 58
AG4
8
280 308Right-handed alpha
Helix 59
AG5
8
352 356Right-handed 310
Helix 60
AG6
8
394 401Right-handed alpha
Helix 61
AG7
8
417 423Right-handed alpha
Helix 62
AG8
8
427 446Right-handed alpha
Helix 63
AG9
1
6 17Right-handed alpha
Helix 64
AH1
1
18 23Right-handed alpha
Helix 65
AH2
1
26 37Right-handed alpha
Helix 66
AH3
1
38 41Right-handed 310
Helix 67
AH4
1
70 81Right-handed alpha
Helix 68
AH5
1
107 116Right-handed alpha
Helix 69
AH6
1
317 321Right-handed alpha
Helix 70
AH7
1
497 504Right-handed alpha
Helix 71
AH8
1
596 613Right-handed alpha
Helix 72
AH9
1
708 725Right-handed alpha
Helix 73
AI1
1
727 742Right-handed alpha
Helix 74
AI2
1
752 781Right-handed alpha
Helix 75
AI3
1
914 932Right-handed alpha
Helix 76
AI4
1
944 949Right-handed 310
Helix 77
AI5
1
950 955Right-handed alpha
Helix 78
AI6
1
3786 3799Right-handed alpha
Helix 79
AI7
1
3810 3827Right-handed alpha
Helix 80
AI8
1
3837 3849Right-handed alpha
Helix 81
AI9
1
3856 3880Right-handed alpha
Helix 82
AJ1
1
3891 3908Right-handed alpha
Helix 83
AJ2
4
92 97Right-handed alpha
Helix 84
AJ3
4
205 209Right-handed 310
Helix 85
AJ4
4
212 221Right-handed alpha
Helix 86
AJ5
4
223 230Right-handed alpha
Helix 87
AJ6
4
271 277Right-handed alpha
Helix 88
AJ7
9
224 240Right-handed alpha
Helix 89
AJ8
9
243 254Right-handed alpha
Helix 90
AJ9
9
261 279Right-handed alpha
Helix 91
AK1
9
304 314Right-handed alpha
Helix 92
AK2
9
345 350Right-handed alpha
Helix 93
AK3
9
352 371Right-handed alpha
Helix 94
AK4
9
3188 3199Right-handed alpha
Helix 95
AK5
9
3205 3215Right-handed alpha
Helix 96
AK6
9
3292 3298Right-handed alpha
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There are 7 sheets in PDB entry 6SWY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
5
214 218first strand
Strand 2
1
99 103anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
8
32 33first strand
Strand 2
8
448 449parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
337 339first strand
Strand 2
1
347 349anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
386 389first strand
Strand 2
1
571 577anti-parallel
Strand 3
1
422 428anti-parallel
Strand 4
1
509 513anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
557 564first strand
Strand 2
1
549 554anti-parallel
Strand 3
1
538 544anti-parallel
Strand 4
1
401 410anti-parallel
Strand 5
1
582 586anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
687 688first strand
Strand 2
1
691 692anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
128 135first strand
Strand 2
4
138 149anti-parallel
Strand 3
4
163 170anti-parallel
Strand 4
4
179 187anti-parallel
Strand 5
4
287 297anti-parallel
Strand 6
4
315 321anti-parallel
Strand 7
4
327 332anti-parallel
Strand 8
4
343 346anti-parallel
Strand 9
4
128 135anti-parallel
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