Analysis of interatomic Contacts of Structural Units in PDB entry:
6SXA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6SXA entry

There are 2 chains in PDB entry 6SXA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	ARG 9	ALA 906
G	SER 100	LYS 295

There are 47 helices in PDB entry 6SXA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	16	29	Right-handed alpha
Helix 2	AA2	F	40	53	Right-handed alpha
Helix 3	AA3	F	65	80	Right-handed alpha
Helix 4	AA4	F	93	98	Right-handed alpha
Helix 5	AA5	F	99	104	Right-handed alpha
Helix 6	AA6	F	110	121	Right-handed alpha
Helix 7	AA7	F	135	141	Right-handed 310
Helix 8	AA8	F	143	153	Right-handed alpha
Helix 9	AA9	F	177	185	Right-handed alpha
Helix 10	AB1	F	197	202	Right-handed alpha
Helix 11	AB2	F	202	207	Right-handed alpha
Helix 12	AB3	F	222	243	Right-handed alpha
Helix 13	AB4	F	254	259	Right-handed alpha
Helix 14	AB5	F	262	270	Right-handed alpha
Helix 15	AB6	F	280	301	Right-handed alpha
Helix 16	AB7	F	302	313	Right-handed alpha
Helix 17	AB8	F	333	344	Right-handed alpha
Helix 18	AB9	F	379	397	Right-handed alpha
Helix 19	AC1	F	398	403	Right-handed alpha
Helix 20	AC2	F	413	426	Right-handed alpha
Helix 21	AC3	F	427	440	Right-handed alpha
Helix 22	AC4	F	565	573	Right-handed alpha
Helix 23	AC5	F	584	595	Right-handed alpha
Helix 24	AC6	F	613	638	Right-handed alpha
Helix 25	AC7	F	689	692	Right-handed 310
Helix 26	AC8	F	694	700	Right-handed alpha
Helix 27	AC9	F	729	738	Right-handed alpha
Helix 28	AD1	F	741	752	Right-handed alpha
Helix 29	AD2	F	771	778	Right-handed alpha
Helix 30	AD3	F	783	795	Right-handed alpha
Helix 31	AD4	F	805	817	Right-handed alpha
Helix 32	AD5	F	827	832	Right-handed alpha
Helix 33	AD6	F	847	855	Right-handed alpha
Helix 34	AD7	F	859	868	Right-handed alpha
Helix 35	AD8	F	880	889	Right-handed alpha
Helix 36	AD9	F	891	902	Right-handed alpha
Helix 37	AE1	G	112	116	Right-handed 310
Helix 38	AE2	G	143	149	Right-handed alpha
Helix 39	AE3	G	152	161	Right-handed alpha
Helix 40	AE4	G	180	191	Right-handed alpha
Helix 41	AE5	G	203	214	Right-handed alpha
Helix 42	AE6	G	230	239	Right-handed alpha
Helix 43	AE7	G	240	242	Right-handed 310
Helix 44	AE8	G	246	255	Right-handed alpha
Helix 45	AE9	G	259	264	Right-handed alpha
Helix 46	AF1	G	269	273	Right-handed 310
Helix 47	AF2	G	278	289	Right-handed alpha

There are 7 sheets in PDB entry 6SXA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	86	87	first strand
Strand 2	F	105	108	parallel
Strand 3	F	58	61	parallel
Strand 4	F	130	133	parallel
Strand 5	F	160	165	parallel
Strand 6	F	32	34	parallel
Strand 7	F	191	192	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	214	216	first strand
Strand 2	F	608	610	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	410	411	first strand
Strand 2	F	555	556	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	705	709	first strand
Strand 2	F	683	687	parallel
Strand 3	F	716	717	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	723	728	first strand
Strand 2	F	755	760	parallel
Strand 3	F	799	803	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	121	123	first strand
Strand 2	G	101	103	parallel
Strand 3	G	130	132	anti-parallel
Strand 4	G	136	138	anti-parallel
Strand 5	G	166	167	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	140	142	first strand
Strand 2	G	169	172	parallel
Strand 3	G	196	199	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6SXA

Analysis of interatomic Contacts of Structural Units in PDB entry:
6SXA