Analysis of interatomic Contacts of Structural Units in PDB entry:
6SXF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SXF entry

There are 2 chains in PDB entry 6SXF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -1GLN 269
B
 SER -1GLN 269
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 6SXF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 10Right-handed alpha
Helix 2
AA2
A
11 32Right-handed alpha
Helix 3
AA3
A
38 68Right-handed alpha
Helix 4
AA4
A
68 73Right-handed alpha
Helix 5
AA5
A
75 88Right-handed alpha
Helix 6
AA6
A
103 107Right-handed 310
Helix 7
AA7
A
108 114Right-handed alpha
Helix 8
AA8
A
114 128Right-handed alpha
Helix 9
AA9
A
131 154Right-handed alpha
Helix 10
AB1
A
157 162Right-handed alpha
Helix 11
AB2
A
163 176Right-handed alpha
Helix 12
AB3
A
184 192Right-handed alpha
Helix 13
AB4
A
195 235Right-handed alpha
Helix 14
AB5
A
240 268Right-handed alpha
Helix 15
AB6
B
0 10Right-handed alpha
Helix 16
AB7
B
11 32Right-handed alpha
Helix 17
AB8
B
38 68Right-handed alpha
Helix 18
AB9
B
68 73Right-handed alpha
Helix 19
AC1
B
75 89Right-handed alpha
Helix 20
AC2
B
100 107Right-handed 310
Helix 21
AC3
B
108 114Right-handed alpha
Helix 22
AC4
B
114 127Right-handed alpha
Helix 23
AC5
B
127 154Right-handed alpha
Helix 24
AC6
B
157 162Right-handed alpha
Helix 25
AC7
B
163 176Right-handed alpha
Helix 26
AC8
B
184 192Right-handed alpha
Helix 27
AC9
B
195 235Right-handed alpha
Helix 28
AD1
B
240 247Right-handed alpha
Helix 29
AD2
B
247 268Right-handed alpha
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There are no sheets in PDB entry 6SXF
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il