Analysis of interatomic Contacts of Structural Units in PDB entry:
6SXL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SXL entry

There are 2 chains in PDB entry 6SXL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 9ARG 300
B
 PHE 11ARG 300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6SXL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 32Right-handed alpha
Helix 2
AA2
A
37 49Right-handed alpha
Helix 3
AA3
A
54 67Right-handed alpha
Helix 4
AA4
A
70 94Right-handed alpha
Helix 5
AA5
A
108 114Right-handed alpha
Helix 6
AA6
A
114 135Right-handed alpha
Helix 7
AA7
A
140 156Right-handed alpha
Helix 8
AA8
A
159 169Right-handed alpha
Helix 9
AA9
A
178 188Right-handed alpha
Helix 10
AB1
A
190 205Right-handed alpha
Helix 11
AB2
A
207 236Right-handed alpha
Helix 12
AB3
A
261 280Right-handed alpha
Helix 13
AB4
A
281 286Right-handed 310
Helix 14
AB5
A
287 299Right-handed alpha
Helix 15
AB6
B
12 32Right-handed alpha
Helix 16
AB7
B
37 49Right-handed alpha
Helix 17
AB8
B
54 67Right-handed alpha
Helix 18
AB9
B
70 94Right-handed alpha
Helix 19
AC1
B
108 114Right-handed alpha
Helix 20
AC2
B
114 135Right-handed alpha
Helix 21
AC3
B
140 156Right-handed alpha
Helix 22
AC4
B
159 172Right-handed alpha
Helix 23
AC5
B
180 189Right-handed alpha
Helix 24
AC6
B
190 205Right-handed alpha
Helix 25
AC7
B
207 229Right-handed alpha
Helix 26
AC8
B
264 278Right-handed alpha
Helix 27
AC9
B
287 299Right-handed alpha
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There are 2 sheets in PDB entry 6SXL. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 103first strand
Strand 2
A
106 107anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 103first strand
Strand 2
B
106 107anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il