Analysis of interatomic Contacts of Structural Units in PDB entry:
6SXN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SXN entry

There are 6 chains in PDB entry 6SXN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 9ALA 300
B
 GLN 9ILE 297
C
 GLN 9ILE 297
D
 GLN 9ILE 297
E
 VAL 3ARG 300
F
 GLN 9ARG 300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 6SXN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 32Right-handed alpha
Helix 2
AA2
A
37 50Right-handed alpha
Helix 3
AA3
A
54 67Right-handed alpha
Helix 4
AA4
A
70 93Right-handed alpha
Helix 5
AA5
A
108 114Right-handed alpha
Helix 6
AA6
A
114 135Right-handed alpha
Helix 7
AA7
A
140 156Right-handed alpha
Helix 8
AA8
A
159 171Right-handed alpha
Helix 9
AA9
A
178 205Right-handed alpha
Helix 10
AB1
A
207 231Right-handed alpha
Helix 11
AB2
A
265 278Right-handed alpha
Helix 12
AB3
A
280 286Right-handed 310
Helix 13
AB4
A
287 299Right-handed alpha
Helix 14
AB5
B
12 32Right-handed alpha
Helix 15
AB6
B
37 50Right-handed alpha
Helix 16
AB7
B
54 67Right-handed alpha
Helix 17
AB8
B
70 93Right-handed alpha
Helix 18
AB9
B
108 114Right-handed alpha
Helix 19
AC1
B
114 135Right-handed alpha
Helix 20
AC2
B
140 156Right-handed alpha
Helix 21
AC3
B
159 171Right-handed alpha
Helix 22
AC4
B
178 205Right-handed alpha
Helix 23
AC5
B
207 231Right-handed alpha
Helix 24
AC6
B
265 278Right-handed alpha
Helix 25
AC7
B
280 286Right-handed 310
Helix 26
AC8
B
287 295Right-handed alpha
Helix 27
AC9
C
12 32Right-handed alpha
Helix 28
AD1
C
37 50Right-handed alpha
Helix 29
AD2
C
54 67Right-handed alpha
Helix 30
AD3
C
70 93Right-handed alpha
Helix 31
AD4
C
108 114Right-handed alpha
Helix 32
AD5
C
114 135Right-handed alpha
Helix 33
AD6
C
140 156Right-handed alpha
Helix 34
AD7
C
159 170Right-handed alpha
Helix 35
AD8
C
179 205Right-handed alpha
Helix 36
AD9
C
207 231Right-handed alpha
Helix 37
AE1
C
265 278Right-handed alpha
Helix 38
AE2
C
280 286Right-handed 310
Helix 39
AE3
C
287 297Right-handed alpha
Helix 40
AE4
D
12 32Right-handed alpha
Helix 41
AE5
D
37 50Right-handed alpha
Helix 42
AE6
D
54 67Right-handed alpha
Helix 43
AE7
D
70 93Right-handed alpha
Helix 44
AE8
D
108 114Right-handed alpha
Helix 45
AE9
D
114 135Right-handed alpha
Helix 46
AF1
D
140 156Right-handed alpha
Helix 47
AF2
D
159 171Right-handed alpha
Helix 48
AF3
D
178 205Right-handed alpha
Helix 49
AF4
D
207 229Right-handed alpha
Helix 50
AF5
D
265 278Right-handed alpha
Helix 51
AF6
D
280 286Right-handed 310
Helix 52
AF7
D
287 295Right-handed alpha
Helix 53
AF8
E
12 32Right-handed alpha
Helix 54
AF9
E
37 50Right-handed alpha
Helix 55
AG1
E
54 67Right-handed alpha
Helix 56
AG2
E
70 93Right-handed alpha
Helix 57
AG3
E
108 114Right-handed alpha
Helix 58
AG4
E
114 135Right-handed alpha
Helix 59
AG5
E
140 156Right-handed alpha
Helix 60
AG6
E
159 171Right-handed alpha
Helix 61
AG7
E
178 205Right-handed alpha
Helix 62
AG8
E
207 228Right-handed alpha
Helix 63
AG9
E
265 278Right-handed alpha
Helix 64
AH1
E
280 286Right-handed 310
Helix 65
AH2
E
287 300Right-handed alpha
Helix 66
AH3
F
12 32Right-handed alpha
Helix 67
AH4
F
37 50Right-handed alpha
Helix 68
AH5
F
54 67Right-handed alpha
Helix 69
AH6
F
70 93Right-handed alpha
Helix 70
AH7
F
108 114Right-handed alpha
Helix 71
AH8
F
114 135Right-handed alpha
Helix 72
AH9
F
140 156Right-handed alpha
Helix 73
AI1
F
159 172Right-handed alpha
Helix 74
AI2
F
180 205Right-handed alpha
Helix 75
AI3
F
207 230Right-handed alpha
Helix 76
AI4
F
266 278Right-handed alpha
Helix 77
AI5
F
280 286Right-handed 310
Helix 78
AI6
F
287 299Right-handed alpha
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There are 6 sheets in PDB entry 6SXN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 103first strand
Strand 2
A
106 107anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 103first strand
Strand 2
B
106 107anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
102 103first strand
Strand 2
C
106 107anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
102 103first strand
Strand 2
D
106 107anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
102 103first strand
Strand 2
E
106 107anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
102 103first strand
Strand 2
F
106 107anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il