Analysis of interatomic Contacts of Structural Units in PDB entry:
6SY0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SY0 entry

There are 12 chains in PDB entry 6SY0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3SER 113
A
 LYS 115ASN 139
B
 GLN 8SER 113
B
 LYS 115ASN 139
C
 VAL 11SER 113
C
 LYS 115THR 128
E
 G 1 C 18
F
 G 1 C 18
G
 G 1 C 18
H
 G 1 C 18
K
 G 1 C 18
L
 G 1 C 18
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6SY0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 42Right-handed alpha
Helix 2
AA2
A
42 60Right-handed alpha
Helix 3
AA3
A
62 67Right-handed alpha
Helix 4
AA4
A
82 85Right-handed 310
Helix 5
AA5
A
114 118Right-handed alpha
Helix 6
AA6
A
118 135Right-handed alpha
Helix 7
AA7
B
42 60Right-handed alpha
Helix 8
AA8
B
62 67Right-handed alpha
Helix 9
AA9
B
114 118Right-handed alpha
Helix 10
AB1
B
118 136Right-handed alpha
Helix 11
AB2
C
38 42Right-handed alpha
Helix 12
AB3
C
42 61Right-handed alpha
Helix 13
AB4
C
62 67Right-handed alpha
Helix 14
AB5
C
114 118Right-handed alpha
Helix 15
AB6
C
120 126Right-handed alpha
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There are 5 sheets in PDB entry 6SY0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 15first strand
Strand 2
A
20 27anti-parallel
Strand 3
A
30 37anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 81first strand
Strand 2
A
86 91anti-parallel
Strand 3
A
96 103anti-parallel
Strand 4
A
106 113anti-parallel
Strand 5
B
106 113anti-parallel
Strand 6
B
96 103anti-parallel
Strand 7
B
86 91anti-parallel
Strand 8
B
74 81anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 15first strand
Strand 2
B
20 27anti-parallel
Strand 3
B
30 37anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 15first strand
Strand 2
C
20 27anti-parallel
Strand 3
C
30 37anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
74 76first strand
Strand 2
C
89 91anti-parallel
Strand 3
C
96 97anti-parallel
Strand 4
C
112 113anti-parallel
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