Analysis of interatomic Contacts of Structural Units in PDB entry:
6SYL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SYL entry

There are 2 chains in PDB entry 6SYL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 9GLY 347
B
 ILE 9GLY 348
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 6SYL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 23Right-handed alpha
Helix 2
AA2
A
26 30Right-handed 310
Helix 3
AA3
A
36 45Right-handed alpha
Helix 4
AA4
A
46 61Right-handed alpha
Helix 5
AA5
A
121 133Right-handed alpha
Helix 6
AA6
A
159 175Right-handed alpha
Helix 7
AA7
A
193 208Right-handed alpha
Helix 8
AA8
A
210 214Right-handed 310
Helix 9
AA9
A
234 239Right-handed alpha
Helix 10
AB1
A
249 257Right-handed alpha
Helix 11
AB2
A
257 262Right-handed alpha
Helix 12
AB3
A
268 272Right-handed 310
Helix 13
AB4
A
273 278Right-handed alpha
Helix 14
AB5
A
293 307Right-handed alpha
Helix 15
AB6
A
322 326Right-handed 310
Helix 16
AB7
A
330 346Right-handed alpha
Helix 17
AB8
B
16 24Right-handed alpha
Helix 18
AB9
B
36 45Right-handed alpha
Helix 19
AC1
B
46 61Right-handed alpha
Helix 20
AC2
B
121 133Right-handed alpha
Helix 21
AC3
B
159 175Right-handed alpha
Helix 22
AC4
B
192 208Right-handed alpha
Helix 23
AC5
B
210 214Right-handed 310
Helix 24
AC6
B
234 239Right-handed alpha
Helix 25
AC7
B
249 257Right-handed alpha
Helix 26
AC8
B
257 262Right-handed alpha
Helix 27
AC9
B
268 272Right-handed 310
Helix 28
AD1
B
273 278Right-handed alpha
Helix 29
AD2
B
293 307Right-handed alpha
Helix 30
AD3
B
322 326Right-handed 310
Helix 31
AD4
B
330 346Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6SYL.

There are 16 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 83first strand
Strand 2
A
88 97anti-parallel
Strand 3
A
137 142anti-parallel
Strand 4
A
103 109parallel
Strand 5
A
181 192parallel
Strand 6
A
216 222parallel
Strand 7
A
283 288parallel
Strand 8
A
311 317parallel
Strand 9
B
311 316anti-parallel
Strand 10
B
283 288parallel
Strand 11
B
216 220parallel
Strand 12
B
181 191parallel
Strand 13
B
103 109parallel
Strand 14
B
137 142parallel
Strand 15
B
88 97anti-parallel
Strand 16
B
74 83anti-parallel
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