Analysis of interatomic Contacts of Structural Units in PDB entry:
6SYT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SYT entry

There are 3 chains in PDB entry 6SYT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 UNK 147VAL 3661
B
 PRO 4TRP 559
C
 LEU 171LEU 519
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are134 helices in PDB entry 6SYT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
147 156Right-handed alpha
Helix 2
AA2
A
163 175Right-handed alpha
Helix 3
AA3
A
192 201Right-handed alpha
Helix 4
AA4
A
208 224Right-handed alpha
Helix 5
AA5
A
230 244Right-handed alpha
Helix 6
AA6
A
249 265Right-handed alpha
Helix 7
AA7
A
269 285Right-handed alpha
Helix 8
AA8
A
291 304Right-handed alpha
Helix 9
AA9
A
312 324Right-handed alpha
Helix 10
AB1
A
335 347Right-handed alpha
Helix 11
AB2
A
356 374Right-handed alpha
Helix 12
AB3
A
394 412Right-handed alpha
Helix 13
AB4
A
428 445Right-handed alpha
Helix 14
AB5
A
449 465Right-handed alpha
Helix 15
AB6
A
474 489Right-handed alpha
Helix 16
AB7
A
495 511Right-handed alpha
Helix 17
AB8
A
516 525Right-handed alpha
Helix 18
AB9
A
528 534Right-handed alpha
Helix 19
AC1
A
538 553Right-handed alpha
Helix 20
AC2
A
561 581Right-handed alpha
Helix 21
AC3
A
582 584Right-handed 310
Helix 22
AC4
A
603 623Right-handed alpha
Helix 23
AC5
A
637 644Right-handed alpha
Helix 24
AC6
A
646 651Right-handed 310
Helix 25
AC7
A
652 657Right-handed alpha
Helix 26
AC8
A
657 673Right-handed alpha
Helix 27
AC9
A
675 679Right-handed 310
Helix 28
AD1
A
706 719Right-handed alpha
Helix 29
AD2
A
724 743Right-handed alpha
Helix 30
AD3
A
745 753Right-handed 310
Helix 31
AD4
A
754 768Right-handed alpha
Helix 32
AD5
A
772 787Right-handed alpha
Helix 33
AD6
A
791 806Right-handed alpha
Helix 34
AD7
A
816 824Right-handed alpha
Helix 35
AD8
A
835 850Right-handed alpha
Helix 36
AD9
A
858 871Right-handed alpha
Helix 37
AE1
A
883 891Right-handed alpha
Helix 38
AE2
A
902 906Right-handed 310
Helix 39
AE3
A
908 927Right-handed alpha
Helix 40
AE4
A
935 956Right-handed alpha
Helix 41
AE5
A
971 999Right-handed alpha
Helix 42
AE6
A
1019 1041Right-handed alpha
Helix 43
AE7
A
1044 1058Right-handed alpha
Helix 44
AE8
A
1068 1081Right-handed alpha
Helix 45
AE9
A
1082 1084Right-handed 310
Helix 46
AF1
A
1085 1098Right-handed alpha
Helix 47
AF2
A
1106 1115Right-handed alpha
Helix 48
AF3
A
1117 1134Right-handed alpha
Helix 49
AF4
A
1143 1148Right-handed alpha
Helix 50
AF5
A
1149 1151Right-handed 310
Helix 51
AF6
A
1179 1196Right-handed alpha
Helix 52
AF7
A
1199 1218Right-handed alpha
Helix 53
AF8
A
1227 1238Right-handed alpha
Helix 54
AF9
A
1241 1250Right-handed alpha
Helix 55
AG1
A
1281 1305Right-handed alpha
Helix 56
AG2
A
1316 1331Right-handed alpha
Helix 57
AG3
A
1332 1339Right-handed alpha
Helix 58
AG4
A
1348 1365Right-handed alpha
Helix 59
AG5
A
1370 1374Right-handed 310
Helix 60
AG6
A
1378 1384Right-handed 310
Helix 61
AG7
A
1391 1406Right-handed alpha
Helix 62
AG8
A
1407 1410Right-handed 310
Helix 63
AG9
A
1417 1434Right-handed alpha
Helix 64
AH1
A
1437 1449Right-handed alpha
Helix 65
AH2
A
1458 1467Right-handed alpha
Helix 66
AH3
A
1480 1493Right-handed alpha
Helix 67
AH4
A
1496 1513Right-handed alpha
Helix 68
AH5
A
1517 1533Right-handed alpha
Helix 69
AH6
A
1539 1550Right-handed alpha
Helix 70
AH7
A
1559 1570Right-handed alpha
Helix 71
AH8
A
1586 1588Right-handed 310
Helix 72
AH9
A
1589 1594Right-handed alpha
Helix 73
AI1
A
1595 1611Right-handed alpha
Helix 74
AI2
A
1616 1635Right-handed alpha
Helix 75
AI3
A
1647 1657Right-handed alpha
Helix 76
AI4
A
1664 1676Right-handed alpha
Helix 77
AI5
A
1704 1717Right-handed alpha
Helix 78
AI6
A
1728 1741Right-handed alpha
Helix 79
AI7
A
1741 1757Right-handed alpha
Helix 80
AI8
A
1781 1799Right-handed alpha
Helix 81
AI9
A
1805 1811Right-handed alpha
Helix 82
AJ1
A
1818 1821Right-handed 310
Helix 83
AJ2
A
1822 1828Right-handed alpha
Helix 84
AJ3
A
1834 1850Right-handed alpha
Helix 85
AJ4
A
1856 1865Right-handed alpha
Helix 86
AJ5
A
1924 1939Right-handed alpha
Helix 87
AJ6
A
1941 1957Right-handed alpha
Helix 88
AJ7
A
1963 1978Right-handed alpha
Helix 89
AJ8
A
2007 2019Right-handed alpha
Helix 90
AJ9
A
2036 2056Right-handed alpha
Helix 91
AK1
A
2070 2083Right-handed alpha
Helix 92
AK2
A
2161 2175Right-handed alpha
Helix 93
AK3
A
2177 2182Right-handed alpha
Helix 94
AK4
A
2214 2230Right-handed alpha
Helix 95
AK5
A
2249 2264Right-handed alpha
Helix 96
AK6
A
2276 2289Right-handed alpha
Helix 97
AK7
A
2296 2301Right-handed alpha
Helix 98
AK8
A
2302 2304Right-handed 310
Helix 99
AK9
A
2307 2332Right-handed alpha
Helix 100
AL1
A
2361 2365Right-handed 310
Helix 101
AL2
A
2376 2381Right-handed alpha
Helix 102
AL3
A
2390 2406Right-handed alpha
Helix 103
AL4
A
2406 2419Right-handed alpha
Helix 104
AL5
A
3609 3622Right-handed alpha
Helix 105
AL6
A
3632 3646Right-handed alpha
Helix 106
AL7
A
3646 3651Right-handed alpha
Helix 107
AL8
A
3654 3658Right-handed 310
Helix 108
AL9
B
64 72Right-handed alpha
Helix 109
AM1
B
158 172Right-handed alpha
Helix 110
AM2
B
183 205Right-handed alpha
Helix 111
AM3
B
222 242Right-handed alpha
Helix 112
AM4
B
243 246Right-handed 310
Helix 113
AM5
B
252 258Right-handed alpha
Helix 114
AM6
B
296 315Right-handed alpha
Helix 115
AM7
B
347 360Right-handed alpha
Helix 116
AM8
B
409 423Right-handed alpha
Helix 117
AM9
B
444 458Right-handed alpha
Helix 118
AN1
B
477 485Right-handed alpha
Helix 119
AN2
B
489 509Right-handed alpha
Helix 120
AN3
B
524 539Right-handed alpha
Helix 121
AN4
B
543 559Right-handed alpha
Helix 122
AN5
C
194 198Right-handed 310
Helix 123
AN6
C
219 226Right-handed alpha
Helix 124
AN7
C
232 236Right-handed 310
Helix 125
AN8
C
242 247Right-handed alpha
Helix 126
AN9
C
275 284Right-handed alpha
Helix 127
AO1
C
295 315Right-handed alpha
Helix 128
AO2
C
327 338Right-handed alpha
Helix 129
AO3
C
375 379Right-handed 310
Helix 130
AO4
C
380 395Right-handed alpha
Helix 131
AO5
C
418 422Right-handed 310
Helix 132
AO6
C
465 479Right-handed alpha
Helix 133
AO7
C
491 508Right-handed alpha
Helix 134
AO8
C
510 519Right-handed alpha
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There are 4 sheets in PDB entry 6SYT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2090 2091first strand
Strand 2
A
2127 2130anti-parallel
Strand 3
A
2138 2142anti-parallel
Strand 4
A
2150 2154anti-parallel
Strand 5
A
2204 2206anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2212 2213first strand
Strand 2
A
2341 2343anti-parallel
Strand 3
A
2350 2352anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 143first strand
Strand 2
B
148 154anti-parallel
Strand 3
B
48 54parallel
Strand 4
B
209 214parallel
Strand 5
B
264 270parallel
Strand 6
B
337 339parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
181 184first strand
Strand 2
C
256 260anti-parallel
Strand 3
C
265 268anti-parallel
Strand 4
C
205 210parallel
Strand 5
C
317 322parallel
Strand 6
C
368 374parallel
Strand 7
C
428 432parallel
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