Analysis of interatomic Contacts of Structural Units in PDB entry:
6T00


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6T00 entry

There are 8 chains in PDB entry 6T00 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TRP 8
A
 ASN 10GLY 14
A
 GLY 16GLY 16
A
 ILE 18VAL 26
A
 VAL 28HIS 29
A
 SER 31GLY 37
A
 LYS 39SER 48
A
 GLU 50GLU 66
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 6T00. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 33Right-handed 310
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There is 1 sheet (AA1) in PDB entry 6T00.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 29first strand
Strand 2
A
15 19anti-parallel
Strand 3
A
2 10anti-parallel
Strand 4
A
46 54anti-parallel
Strand 5
A
57 65anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il