Analysis of interatomic Contacts of Structural Units in PDB entry:
6T1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6T1V entry

There are 2 chains in PDB entry 6T1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 238TYR 505
C
 PRO 141ALA 150
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6T1V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
238 254Right-handed alpha
Helix 2
AA2
A
257 266Right-handed alpha
Helix 3
AA3
A
279 287Right-handed alpha
Helix 4
AA4
A
288 290Right-handed 310
Helix 5
AA5
A
297 301Right-handed 310
Helix 6
AA6
A
304 329Right-handed alpha
Helix 7
AA7
A
338 361Right-handed alpha
Helix 8
AA8
A
378 383Right-handed alpha
Helix 9
AA9
A
387 391Right-handed 310
Helix 10
AB1
A
392 404Right-handed alpha
Helix 11
AB2
A
408 421Right-handed alpha
Helix 12
AB3
A
430 453Right-handed alpha
Helix 13
AB4
A
458 488Right-handed alpha
Helix 14
AB5
A
494 502Right-handed alpha
Helix 15
AB6
C
142 149Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6T1V.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 277first strand
Strand 2
A
374 377parallel
Strand 3
A
366 369anti-parallel
Strand 4
A
362 363anti-parallel
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