Analysis of interatomic Contacts of Structural Units in PDB entry:
6T1W

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6T1W entry

There are 4 chains in PDB entry 6T1W (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 24	THR 809
B	GLN 265	GLY 807
C	ILE 51	ASN 130
D	ILE 51	ILE 131

There are 26 helices in PDB entry 6T1W. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	38	45	Right-handed alpha
Helix 2	AA2	A	58	68	Right-handed alpha
Helix 3	AA3	A	106	118	Right-handed alpha
Helix 4	AA4	A	129	141	Right-handed alpha
Helix 5	AA5	A	142	144	Right-handed 310
Helix 6	AA6	A	189	194	Right-handed alpha
Helix 7	AA7	A	220	232	Right-handed alpha
Helix 8	AA8	A	280	288	Right-handed alpha
Helix 9	AA9	A	297	315	Right-handed alpha
Helix 10	AB1	A	364	368	Right-handed 310
Helix 11	AB2	A	378	385	Right-handed alpha
Helix 12	AB3	A	386	391	Right-handed alpha
Helix 13	AB4	A	497	500	Right-handed 310
Helix 14	AB5	A	542	553	Right-handed alpha
Helix 15	AB6	A	647	651	Right-handed 310
Helix 16	AB7	A	691	695	Right-handed 310
Helix 17	AB8	B	280	288	Right-handed alpha
Helix 18	AB9	B	297	316	Right-handed alpha
Helix 19	AC1	B	497	500	Right-handed 310
Helix 20	AC2	B	542	553	Right-handed alpha
Helix 21	AC3	B	647	651	Right-handed 310
Helix 22	AC4	B	691	695	Right-handed 310
Helix 23	AC5	C	55	59	Right-handed 310
Helix 24	AC6	C	84	98	Right-handed alpha
Helix 25	AC7	D	55	59	Right-handed 310
Helix 26	AC8	D	84	98	Right-handed alpha

There are 18 sheets in PDB entry 6T1W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	32	first strand
Strand 2	A	83	90	parallel
Strand 3	A	72	79	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	100	first strand
Strand 2	A	162	171	parallel
Strand 3	A	149	157	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	177	183	first strand
Strand 2	A	254	261	parallel
Strand 3	A	239	247	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	268	275	first strand
Strand 2	A	335	342	parallel
Strand 3	A	321	327	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	348	349	first strand
Strand 2	A	375	376	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	352	355	first strand
Strand 2	A	412	418	parallel
Strand 3	A	398	404	anti-parallel

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There are 11 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	424	432	first strand
Strand 2	A	438	446	anti-parallel
Strand 3	A	455	462	anti-parallel
Strand 4	A	467	474	anti-parallel
Strand 5	A	487	495	anti-parallel
Strand 6	A	505	518	anti-parallel
Strand 7	A	523	537	anti-parallel
Strand 8	A	564	579	anti-parallel
Strand 9	A	590	600	anti-parallel
Strand 10	A	608	620	anti-parallel
Strand 11	A	639	640	anti-parallel

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There are 12 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	484	485	first strand
Strand 2	A	505	518	anti-parallel
Strand 3	A	523	537	anti-parallel
Strand 4	A	564	579	anti-parallel
Strand 5	A	590	600	anti-parallel
Strand 6	A	608	620	anti-parallel
Strand 7	A	628	637	anti-parallel
Strand 8	A	710	721	anti-parallel
Strand 9	A	734	745	anti-parallel
Strand 10	A	767	778	anti-parallel
Strand 11	A	781	792	anti-parallel
Strand 12	A	802	803	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	662	663	first strand
Strand 2	A	799	800	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	671	674	first strand
Strand 2	A	700	705	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	267	275	first strand
Strand 2	B	334	342	parallel
Strand 3	B	321	327	anti-parallel

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There are 16 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	424	433	first strand
Strand 2	B	437	446	anti-parallel
Strand 3	B	455	462	anti-parallel
Strand 4	B	466	474	anti-parallel
Strand 5	B	488	495	anti-parallel
Strand 6	B	505	514	anti-parallel
Strand 7	B	524	537	anti-parallel
Strand 8	B	564	579	anti-parallel
Strand 9	B	590	600	anti-parallel
Strand 10	B	608	620	anti-parallel
Strand 11	B	628	640	anti-parallel
Strand 12	B	710	721	anti-parallel
Strand 13	B	733	745	anti-parallel
Strand 14	B	767	776	anti-parallel
Strand 15	B	784	792	anti-parallel
Strand 16	B	802	805	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	662	663	first strand
Strand 2	B	799	800	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	671	674	first strand
Strand 2	B	700	705	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	64	65	first strand
Strand 2	C	120	130	anti-parallel
Strand 3	C	69	75	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	64	65	first strand
Strand 2	C	120	130	anti-parallel
Strand 3	C	103	112	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	64	65	first strand
Strand 2	D	120	130	anti-parallel
Strand 3	D	69	75	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	64	65	first strand
Strand 2	D	120	130	anti-parallel
Strand 3	D	103	112	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6T1W

Analysis of interatomic Contacts of Structural Units in PDB entry:
6T1W