Analysis of interatomic Contacts of Structural Units in PDB entry:
6T2B

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6T2B entry

There are 3 chains in PDB entry 6T2B (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 32	SER 473
B	ALA 31	SER 473
C	ILE 34	SER 445

There are 88 helices in PDB entry 6T2B. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	37	42	Right-handed alpha
Helix 2	AA2	A	76	87	Right-handed alpha
Helix 3	AA3	A	101	117	Right-handed alpha
Helix 4	AA4	A	128	138	Right-handed alpha
Helix 5	AA5	A	147	149	Right-handed 310
Helix 6	AA6	A	150	161	Right-handed alpha
Helix 7	AA7	A	174	189	Right-handed alpha
Helix 8	AA8	A	196	200	Right-handed 310
Helix 9	AA9	A	201	213	Right-handed alpha
Helix 10	AB1	A	230	236	Right-handed 310
Helix 11	AB2	A	238	242	Right-handed 310
Helix 12	AB3	A	243	249	Right-handed alpha
Helix 13	AB4	A	257	268	Right-handed alpha
Helix 14	AB5	A	288	298	Right-handed alpha
Helix 15	AB6	A	302	306	Right-handed 310
Helix 16	AB7	A	375	387	Right-handed alpha
Helix 17	AB8	A	388	402	Right-handed alpha
Helix 18	AB9	A	403	405	Right-handed 310
Helix 19	AC1	A	406	422	Right-handed alpha
Helix 20	AC2	A	428	437	Right-handed alpha
Helix 21	AC3	A	437	448	Right-handed alpha
Helix 22	AC4	A	461	466	Right-handed 310
Helix 23	AC5	B	37	42	Right-handed alpha
Helix 24	AC6	B	76	87	Right-handed alpha
Helix 25	AC7	B	101	117	Right-handed alpha
Helix 26	AC8	B	129	138	Right-handed alpha
Helix 27	AC9	B	147	149	Right-handed 310
Helix 28	AD1	B	150	161	Right-handed alpha
Helix 29	AD2	B	174	189	Right-handed alpha
Helix 30	AD3	B	196	200	Right-handed 310
Helix 31	AD4	B	201	213	Right-handed alpha
Helix 32	AD5	B	230	236	Right-handed 310
Helix 33	AD6	B	238	242	Right-handed 310
Helix 34	AD7	B	243	248	Right-handed alpha
Helix 35	AD8	B	257	268	Right-handed alpha
Helix 36	AD9	B	288	298	Right-handed alpha
Helix 37	AE1	B	302	307	Right-handed alpha
Helix 38	AE2	B	375	387	Right-handed alpha
Helix 39	AE3	B	388	402	Right-handed alpha
Helix 40	AE4	B	403	405	Right-handed 310
Helix 41	AE5	B	406	422	Right-handed alpha
Helix 42	AE6	B	428	437	Right-handed alpha
Helix 43	AE7	B	437	448	Right-handed alpha
Helix 44	AE8	B	461	466	Right-handed 310
Helix 45	AE9	C	37	42	Right-handed alpha
Helix 46	AF1	C	76	87	Right-handed alpha
Helix 47	AF2	C	101	117	Right-handed alpha
Helix 48	AF3	C	128	138	Right-handed alpha
Helix 49	AF4	C	147	149	Right-handed 310
Helix 50	AF5	C	150	161	Right-handed alpha
Helix 51	AF6	C	174	189	Right-handed alpha
Helix 52	AF7	C	196	200	Right-handed 310
Helix 53	AF8	C	201	213	Right-handed alpha
Helix 54	AF9	C	230	236	Right-handed 310
Helix 55	AG1	C	239	242	Right-handed 310
Helix 56	AG2	C	243	248	Right-handed alpha
Helix 57	AG3	C	257	268	Right-handed alpha
Helix 58	AG4	C	288	298	Right-handed alpha
Helix 59	AG5	C	302	307	Right-handed alpha
Helix 60	AG6	C	375	387	Right-handed alpha
Helix 61	AG7	C	388	402	Right-handed alpha
Helix 62	AG8	C	403	405	Right-handed 310
Helix 63	AG9	C	406	422	Right-handed alpha
Helix 64	AH1	C	428	437	Right-handed alpha
Helix 65	AH2	C	437	448	Right-handed alpha
Helix 66	AH3	C	461	466	Right-handed 310
Helix 67	AH4	D	37	42	Right-handed alpha
Helix 68	AH5	D	76	87	Right-handed alpha
Helix 69	AH6	D	101	117	Right-handed alpha
Helix 70	AH7	D	128	138	Right-handed alpha
Helix 71	AH8	D	147	149	Right-handed 310
Helix 72	AH9	D	150	161	Right-handed alpha
Helix 73	AI1	D	174	189	Right-handed alpha
Helix 74	AI2	D	197	200	Right-handed 310
Helix 75	AI3	D	201	213	Right-handed alpha
Helix 76	AI4	D	230	236	Right-handed 310
Helix 77	AI5	D	239	242	Right-handed 310
Helix 78	AI6	D	243	248	Right-handed alpha
Helix 79	AI7	D	257	268	Right-handed alpha
Helix 80	AI8	D	288	298	Right-handed alpha
Helix 81	AI9	D	302	306	Right-handed 310
Helix 82	AJ1	D	375	387	Right-handed alpha
Helix 83	AJ2	D	388	402	Right-handed alpha
Helix 84	AJ3	D	403	405	Right-handed 310
Helix 85	AJ4	D	406	422	Right-handed alpha
Helix 86	AJ5	D	428	437	Right-handed alpha
Helix 87	AJ6	D	437	448	Right-handed alpha
Helix 88	AJ7	D	461	466	Right-handed 310

There are 8 sheets in PDB entry 6T2B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	121	123	first strand
Strand 2	A	92	98	parallel
Strand 3	A	68	73	parallel
Strand 4	A	141	144	parallel
Strand 5	A	164	167	parallel
Strand 6	A	192	194	parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	373	374	first strand
Strand 2	A	358	361	anti-parallel
Strand 3	A	350	353	anti-parallel
Strand 4	A	344	347	anti-parallel
Strand 5	A	219	227	anti-parallel
Strand 6	A	326	332	parallel
Strand 7	A	315	321	anti-parallel
Strand 8	A	277	284	anti-parallel
Strand 9	A	453	454	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	121	123	first strand
Strand 2	B	92	98	parallel
Strand 3	B	68	73	parallel
Strand 4	B	141	144	parallel
Strand 5	B	164	167	parallel
Strand 6	B	192	194	parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	373	374	first strand
Strand 2	B	358	361	anti-parallel
Strand 3	B	350	353	anti-parallel
Strand 4	B	344	347	anti-parallel
Strand 5	B	219	227	anti-parallel
Strand 6	B	326	332	parallel
Strand 7	B	315	321	anti-parallel
Strand 8	B	277	284	anti-parallel
Strand 9	B	453	454	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	121	123	first strand
Strand 2	C	92	98	parallel
Strand 3	C	68	73	parallel
Strand 4	C	141	144	parallel
Strand 5	C	164	167	parallel
Strand 6	C	192	194	parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	373	374	first strand
Strand 2	C	358	361	anti-parallel
Strand 3	C	350	353	anti-parallel
Strand 4	C	344	347	anti-parallel
Strand 5	C	219	227	anti-parallel
Strand 6	C	326	332	parallel
Strand 7	C	315	321	anti-parallel
Strand 8	C	277	284	anti-parallel
Strand 9	C	453	454	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	121	124	first strand
Strand 2	D	92	99	parallel
Strand 3	D	68	73	parallel
Strand 4	D	141	144	parallel
Strand 5	D	164	167	parallel
Strand 6	D	192	194	parallel

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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	373	374	first strand
Strand 2	D	358	361	anti-parallel
Strand 3	D	350	353	anti-parallel
Strand 4	D	344	347	anti-parallel
Strand 5	D	219	227	anti-parallel
Strand 6	D	326	332	parallel
Strand 7	D	315	321	anti-parallel
Strand 8	D	277	284	anti-parallel
Strand 9	D	453	454	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6T2B

Analysis of interatomic Contacts of Structural Units in PDB entry:
6T2B