Analysis of interatomic Contacts of Structural Units in PDB entry:
6T34

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6T34 entry

There are 38 chains in PDB entry 6T34 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 66	THR 272
a	U 1	U 5
B	PRO 66	THR 272
b	U 1	U 5
C	PRO 66	THR 272
c	U 1	U 5
D	PRO 66	THR 272
d	U 1	U 5
E	PRO 66	THR 272
e	U 1	U 5
F	PRO 66	THR 272
f	U 1	U 5
G	PRO 66	THR 272
g	U 1	U 5
H	PRO 66	THR 272
h	U 1	U 5
I	PRO 66	THR 272
i	U 1	U 5
J	PRO 66	THR 272
j	U 1	U 5
K	PRO 66	THR 272
k	U 1	U 5
L	PRO 66	THR 272
l	U 1	U 5
M	PRO 66	THR 272
m	U 1	U 5
N	PRO 66	THR 272
n	U 1	U 5
O	PRO 66	THR 272
o	U 1	U 5
P	PRO 66	THR 272
p	U 1	U 5
Q	PRO 66	THR 272
q	U 1	U 5
R	PRO 66	THR 272
r	U 1	U 5
S	PRO 66	THR 272
s	U 1	U 5

There are171 helices in PDB entry 6T34. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	97	102	Right-handed alpha
Helix 2	AA2	A	107	123	Right-handed alpha
Helix 3	AA3	A	128	143	Right-handed alpha
Helix 4	AA4	A	166	170	Right-handed 310
Helix 5	AA5	A	177	182	Right-handed alpha
Helix 6	AA6	A	185	199	Right-handed alpha
Helix 7	AA7	A	203	208	Right-handed alpha
Helix 8	AA8	A	214	220	Right-handed 310
Helix 9	AA9	A	232	246	Right-handed alpha
Helix 10	AB1	B	97	102	Right-handed alpha
Helix 11	AB2	B	107	123	Right-handed alpha
Helix 12	AB3	B	128	143	Right-handed alpha
Helix 13	AB4	B	166	170	Right-handed 310
Helix 14	AB5	B	177	182	Right-handed alpha
Helix 15	AB6	B	185	199	Right-handed alpha
Helix 16	AB7	B	203	208	Right-handed alpha
Helix 17	AB8	B	214	220	Right-handed 310
Helix 18	AB9	B	232	246	Right-handed alpha
Helix 19	AC1	C	97	102	Right-handed alpha
Helix 20	AC2	C	107	123	Right-handed alpha
Helix 21	AC3	C	128	143	Right-handed alpha
Helix 22	AC4	C	166	170	Right-handed 310
Helix 23	AC5	C	177	182	Right-handed alpha
Helix 24	AC6	C	185	199	Right-handed alpha
Helix 25	AC7	C	203	208	Right-handed alpha
Helix 26	AC8	C	214	220	Right-handed 310
Helix 27	AC9	C	232	246	Right-handed alpha
Helix 28	AD1	D	97	102	Right-handed alpha
Helix 29	AD2	D	107	123	Right-handed alpha
Helix 30	AD3	D	128	143	Right-handed alpha
Helix 31	AD4	D	166	170	Right-handed 310
Helix 32	AD5	D	177	182	Right-handed alpha
Helix 33	AD6	D	185	199	Right-handed alpha
Helix 34	AD7	D	203	208	Right-handed alpha
Helix 35	AD8	D	214	220	Right-handed 310
Helix 36	AD9	D	232	246	Right-handed alpha
Helix 37	AE1	E	97	102	Right-handed alpha
Helix 38	AE2	E	107	123	Right-handed alpha
Helix 39	AE3	E	128	143	Right-handed alpha
Helix 40	AE4	E	166	170	Right-handed 310
Helix 41	AE5	E	177	182	Right-handed alpha
Helix 42	AE6	E	185	199	Right-handed alpha
Helix 43	AE7	E	203	208	Right-handed alpha
Helix 44	AE8	E	214	220	Right-handed 310
Helix 45	AE9	E	232	246	Right-handed alpha
Helix 46	AF1	F	97	102	Right-handed alpha
Helix 47	AF2	F	107	123	Right-handed alpha
Helix 48	AF3	F	128	143	Right-handed alpha
Helix 49	AF4	F	166	170	Right-handed 310
Helix 50	AF5	F	177	182	Right-handed alpha
Helix 51	AF6	F	185	199	Right-handed alpha
Helix 52	AF7	F	203	208	Right-handed alpha
Helix 53	AF8	F	214	220	Right-handed 310
Helix 54	AF9	F	232	246	Right-handed alpha
Helix 55	AG1	G	97	102	Right-handed alpha
Helix 56	AG2	G	107	123	Right-handed alpha
Helix 57	AG3	G	128	143	Right-handed alpha
Helix 58	AG4	G	166	170	Right-handed 310
Helix 59	AG5	G	177	182	Right-handed alpha
Helix 60	AG6	G	185	199	Right-handed alpha
Helix 61	AG7	G	203	208	Right-handed alpha
Helix 62	AG8	G	214	220	Right-handed 310
Helix 63	AG9	G	232	246	Right-handed alpha
Helix 64	AH1	H	97	102	Right-handed alpha
Helix 65	AH2	H	107	123	Right-handed alpha
Helix 66	AH3	H	128	143	Right-handed alpha
Helix 67	AH4	H	166	170	Right-handed 310
Helix 68	AH5	H	177	182	Right-handed alpha
Helix 69	AH6	H	185	199	Right-handed alpha
Helix 70	AH7	H	203	208	Right-handed alpha
Helix 71	AH8	H	214	220	Right-handed 310
Helix 72	AH9	H	232	246	Right-handed alpha
Helix 73	AI1	I	97	102	Right-handed alpha
Helix 74	AI2	I	107	123	Right-handed alpha
Helix 75	AI3	I	128	143	Right-handed alpha
Helix 76	AI4	I	166	170	Right-handed 310
Helix 77	AI5	I	177	182	Right-handed alpha
Helix 78	AI6	I	185	199	Right-handed alpha
Helix 79	AI7	I	203	208	Right-handed alpha
Helix 80	AI8	I	214	220	Right-handed 310
Helix 81	AI9	I	232	246	Right-handed alpha
Helix 82	AJ1	J	97	102	Right-handed alpha
Helix 83	AJ2	J	107	123	Right-handed alpha
Helix 84	AJ3	J	128	143	Right-handed alpha
Helix 85	AJ4	J	166	170	Right-handed 310
Helix 86	AJ5	J	177	182	Right-handed alpha
Helix 87	AJ6	J	185	199	Right-handed alpha
Helix 88	AJ7	J	203	208	Right-handed alpha
Helix 89	AJ8	J	214	220	Right-handed 310
Helix 90	AJ9	J	232	246	Right-handed alpha
Helix 91	AK1	K	97	102	Right-handed alpha
Helix 92	AK2	K	107	123	Right-handed alpha
Helix 93	AK3	K	128	143	Right-handed alpha
Helix 94	AK4	K	166	170	Right-handed 310
Helix 95	AK5	K	177	182	Right-handed alpha
Helix 96	AK6	K	185	199	Right-handed alpha
Helix 97	AK7	K	203	208	Right-handed alpha
Helix 98	AK8	K	214	220	Right-handed 310
Helix 99	AK9	K	232	246	Right-handed alpha
Helix 100	AL1	L	97	102	Right-handed alpha
Helix 101	AL2	L	107	123	Right-handed alpha
Helix 102	AL3	L	128	143	Right-handed alpha
Helix 103	AL4	L	166	170	Right-handed 310
Helix 104	AL5	L	177	182	Right-handed alpha
Helix 105	AL6	L	185	199	Right-handed alpha
Helix 106	AL7	L	203	208	Right-handed alpha
Helix 107	AL8	L	214	220	Right-handed 310
Helix 108	AL9	L	232	246	Right-handed alpha
Helix 109	AM1	M	97	102	Right-handed alpha
Helix 110	AM2	M	107	123	Right-handed alpha
Helix 111	AM3	M	128	143	Right-handed alpha
Helix 112	AM4	M	166	170	Right-handed 310
Helix 113	AM5	M	177	182	Right-handed alpha
Helix 114	AM6	M	185	199	Right-handed alpha
Helix 115	AM7	M	203	208	Right-handed alpha
Helix 116	AM8	M	214	220	Right-handed 310
Helix 117	AM9	M	232	246	Right-handed alpha
Helix 118	AN1	N	97	102	Right-handed alpha
Helix 119	AN2	N	107	123	Right-handed alpha
Helix 120	AN3	N	128	143	Right-handed alpha
Helix 121	AN4	N	166	170	Right-handed 310
Helix 122	AN5	N	177	182	Right-handed alpha
Helix 123	AN6	N	185	199	Right-handed alpha
Helix 124	AN7	N	203	208	Right-handed alpha
Helix 125	AN8	N	214	220	Right-handed 310
Helix 126	AN9	N	232	246	Right-handed alpha
Helix 127	AO1	O	97	102	Right-handed alpha
Helix 128	AO2	O	107	123	Right-handed alpha
Helix 129	AO3	O	128	143	Right-handed alpha
Helix 130	AO4	O	166	170	Right-handed 310
Helix 131	AO5	O	177	182	Right-handed alpha
Helix 132	AO6	O	185	199	Right-handed alpha
Helix 133	AO7	O	203	208	Right-handed alpha
Helix 134	AO8	O	214	220	Right-handed 310
Helix 135	AO9	O	232	246	Right-handed alpha
Helix 136	AP1	P	97	102	Right-handed alpha
Helix 137	AP2	P	107	123	Right-handed alpha
Helix 138	AP3	P	128	143	Right-handed alpha
Helix 139	AP4	P	166	170	Right-handed 310
Helix 140	AP5	P	177	182	Right-handed alpha
Helix 141	AP6	P	185	199	Right-handed alpha
Helix 142	AP7	P	203	208	Right-handed alpha
Helix 143	AP8	P	214	220	Right-handed 310
Helix 144	AP9	P	232	246	Right-handed alpha
Helix 145	AQ1	Q	97	102	Right-handed alpha
Helix 146	AQ2	Q	107	123	Right-handed alpha
Helix 147	AQ3	Q	128	143	Right-handed alpha
Helix 148	AQ4	Q	166	170	Right-handed 310
Helix 149	AQ5	Q	177	182	Right-handed alpha
Helix 150	AQ6	Q	185	199	Right-handed alpha
Helix 151	AQ7	Q	203	208	Right-handed alpha
Helix 152	AQ8	Q	214	220	Right-handed 310
Helix 153	AQ9	Q	232	246	Right-handed alpha
Helix 154	AR1	R	97	102	Right-handed alpha
Helix 155	AR2	R	107	123	Right-handed alpha
Helix 156	AR3	R	128	143	Right-handed alpha
Helix 157	AR4	R	166	170	Right-handed 310
Helix 158	AR5	R	177	182	Right-handed alpha
Helix 159	AR6	R	185	199	Right-handed alpha
Helix 160	AR7	R	203	208	Right-handed alpha
Helix 161	AR8	R	214	220	Right-handed 310
Helix 162	AR9	R	232	246	Right-handed alpha
Helix 163	AS1	S	97	102	Right-handed alpha
Helix 164	AS2	S	107	123	Right-handed alpha
Helix 165	AS3	S	128	143	Right-handed alpha
Helix 166	AS4	S	166	170	Right-handed 310
Helix 167	AS5	S	177	182	Right-handed alpha
Helix 168	AS6	S	185	199	Right-handed alpha
Helix 169	AS7	S	203	208	Right-handed alpha
Helix 170	AS8	S	214	220	Right-handed 310
Helix 171	AS9	S	232	246	Right-handed alpha

There are 19 sheets in PDB entry 6T34. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	153	154	first strand
Strand 2	A	163	164	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	153	154	first strand
Strand 2	B	163	164	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	153	154	first strand
Strand 2	C	163	164	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	153	154	first strand
Strand 2	D	163	164	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	153	154	first strand
Strand 2	E	163	164	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	153	154	first strand
Strand 2	F	163	164	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	153	154	first strand
Strand 2	G	163	164	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	153	154	first strand
Strand 2	H	163	164	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	153	154	first strand
Strand 2	I	163	164	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	153	154	first strand
Strand 2	J	163	164	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	153	154	first strand
Strand 2	K	163	164	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	153	154	first strand
Strand 2	L	163	164	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	153	154	first strand
Strand 2	M	163	164	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	153	154	first strand
Strand 2	N	163	164	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	153	154	first strand
Strand 2	O	163	164	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	153	154	first strand
Strand 2	P	163	164	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	153	154	first strand
Strand 2	Q	163	164	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	153	154	first strand
Strand 2	R	163	164	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	153	154	first strand
Strand 2	S	163	164	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6T34

Analysis of interatomic Contacts of Structural Units in PDB entry:
6T34