Analysis of interatomic Contacts of Structural Units in PDB entry:
6T3E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6T3E entry

There are 2 chains in PDB entry 6T3E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 5VAL 327
B
 MET 5LEU 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 6T3E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 17Right-handed alpha
Helix 2
AA2
A
18 35Right-handed alpha
Helix 3
AA3
A
49 52Right-handed 310
Helix 4
AA4
A
78 83Right-handed 310
Helix 5
AA5
A
107 127Right-handed alpha
Helix 6
AA6
A
140 154Right-handed alpha
Helix 7
AA7
A
165 181Right-handed alpha
Helix 8
AA8
A
189 196Right-handed alpha
Helix 9
AA9
A
212 216Right-handed 310
Helix 10
AB1
A
236 243Right-handed alpha
Helix 11
AB2
A
249 257Right-handed alpha
Helix 12
AB3
A
257 266Right-handed alpha
Helix 13
AB4
A
270 272Right-handed 310
Helix 14
AB5
A
278 283Right-handed alpha
Helix 15
AB6
A
303 322Right-handed alpha
Helix 16
AB7
B
9 17Right-handed alpha
Helix 17
AB8
B
18 35Right-handed alpha
Helix 18
AB9
B
49 52Right-handed 310
Helix 19
AC1
B
78 83Right-handed 310
Helix 20
AC2
B
107 127Right-handed alpha
Helix 21
AC3
B
140 154Right-handed alpha
Helix 22
AC4
B
165 181Right-handed alpha
Helix 23
AC5
B
189 196Right-handed alpha
Helix 24
AC6
B
212 216Right-handed 310
Helix 25
AC7
B
236 243Right-handed alpha
Helix 26
AC8
B
249 257Right-handed alpha
Helix 27
AC9
B
257 266Right-handed alpha
Helix 28
AD1
B
270 272Right-handed 310
Helix 29
AD2
B
278 283Right-handed alpha
Helix 30
AD3
B
303 322Right-handed alpha
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There are 6 sheets in PDB entry 6T3E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 39first strand
Strand 2
A
53 62anti-parallel
Strand 3
A
44 48anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 39first strand
Strand 2
A
53 62anti-parallel
Strand 3
A
67 75anti-parallel
Strand 4
A
87 94anti-parallel
Strand 5
A
101 106anti-parallel
Strand 6
A
6 8parallel
Strand 7
A
325 326anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 186first strand
Strand 2
A
158 162parallel
Strand 3
A
133 137parallel
Strand 4
A
199 202parallel
Strand 5
A
221 224parallel
Strand 6
A
296 299parallel
Strand 7
A
244 247parallel
Strand 8
A
274 277parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 39first strand
Strand 2
B
53 62anti-parallel
Strand 3
B
44 48anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 39first strand
Strand 2
B
53 62anti-parallel
Strand 3
B
67 75anti-parallel
Strand 4
B
87 94anti-parallel
Strand 5
B
101 106anti-parallel
Strand 6
B
6 8parallel
Strand 7
B
325 326anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
183 186first strand
Strand 2
B
158 162parallel
Strand 3
B
133 137parallel
Strand 4
B
199 202parallel
Strand 5
B
221 224parallel
Strand 6
B
296 299parallel
Strand 7
B
244 247parallel
Strand 8
B
274 277parallel
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