Analysis of interatomic Contacts of Structural Units in PDB entry:
6T3L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6T3L entry

There are 2 chains in PDB entry 6T3L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASP 4HIS 324
A
 PRO 7HIS 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6T3L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
11 15Right-handed 310
Helix 2
AA2
B
23 27Right-handed 310
Helix 3
AA3
B
57 63Right-handed alpha
Helix 4
AA4
B
65 71Right-handed alpha
Helix 5
AA5
B
73 78Right-handed alpha
Helix 6
AA6
B
80 89Right-handed alpha
Helix 7
AA7
B
138 150Right-handed alpha
Helix 8
AA8
B
152 169Right-handed alpha
Helix 9
AA9
B
204 208Right-handed 310
Helix 10
AB1
B
209 219Right-handed alpha
Helix 11
AB2
B
257 267Right-handed alpha
Helix 12
AB3
B
298 324Right-handed alpha
Helix 13
AB4
A
11 15Right-handed 310
Helix 14
AB5
A
23 27Right-handed 310
Helix 15
AB6
A
57 63Right-handed alpha
Helix 16
AB7
A
67 72Right-handed alpha
Helix 17
AB8
A
73 78Right-handed alpha
Helix 18
AB9
A
80 89Right-handed alpha
Helix 19
AC1
A
138 150Right-handed alpha
Helix 20
AC2
A
152 169Right-handed alpha
Helix 21
AC3
A
204 208Right-handed 310
Helix 22
AC4
A
209 219Right-handed alpha
Helix 23
AC5
A
257 267Right-handed alpha
Helix 24
AC6
A
298 324Right-handed alpha
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There are 6 sheets in PDB entry 6T3L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 35first strand
Strand 2
B
232 235anti-parallel
Strand 3
B
51 55anti-parallel
Strand 4
B
40 45anti-parallel
Strand 5
B
121 128anti-parallel
Strand 6
B
109 118anti-parallel
Strand 7
B
99 105anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 203first strand
Strand 2
B
184 191anti-parallel
Strand 3
B
172 178anti-parallel
Strand 4
B
282 291anti-parallel
Strand 5
B
271 279anti-parallel
Strand 6
B
221 224anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
238 239first strand
Strand 2
B
244 245anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 35first strand
Strand 2
A
232 235anti-parallel
Strand 3
A
51 55anti-parallel
Strand 4
A
40 45anti-parallel
Strand 5
A
121 128anti-parallel
Strand 6
A
109 118anti-parallel
Strand 7
A
99 105anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 203first strand
Strand 2
A
184 191anti-parallel
Strand 3
A
172 178anti-parallel
Strand 4
A
282 291anti-parallel
Strand 5
A
271 279anti-parallel
Strand 6
A
221 224anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 239first strand
Strand 2
A
244 245anti-parallel
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