Analysis of interatomic Contacts of Structural Units in PDB entry:
6T3T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6T3T entry

There are 4 chains in PDB entry 6T3T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LYS 2ALA 301
A
 LYS 2ALA 301
C
 LYS 2ALA 301
D
 LYS 2ALA 301
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 6T3T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
20 33Right-handed alpha
Helix 2
AA2
B
47 51Right-handed 310
Helix 3
AA3
B
52 68Right-handed alpha
Helix 4
AA4
B
81 96Right-handed alpha
Helix 5
AA5
B
111 126Right-handed alpha
Helix 6
AA6
B
135 140Right-handed alpha
Helix 7
AA7
B
144 155Right-handed alpha
Helix 8
AA8
B
167 178Right-handed alpha
Helix 9
AA9
B
188 190Right-handed 310
Helix 10
AB1
B
191 198Right-handed alpha
Helix 11
AB2
B
206 210Right-handed 310
Helix 12
AB3
B
211 224Right-handed alpha
Helix 13
AB4
B
226 244Right-handed alpha
Helix 14
AB5
B
250 260Right-handed alpha
Helix 15
AB6
B
275 296Right-handed alpha
Helix 16
AB7
B
297 300Right-handed 310
Helix 17
AB8
A
20 33Right-handed alpha
Helix 18
AB9
A
47 51Right-handed 310
Helix 19
AC1
A
52 68Right-handed alpha
Helix 20
AC2
A
81 96Right-handed alpha
Helix 21
AC3
A
111 126Right-handed alpha
Helix 22
AC4
A
135 140Right-handed alpha
Helix 23
AC5
A
144 155Right-handed alpha
Helix 24
AC6
A
167 178Right-handed alpha
Helix 25
AC7
A
188 190Right-handed 310
Helix 26
AC8
A
191 198Right-handed alpha
Helix 27
AC9
A
206 210Right-handed 310
Helix 28
AD1
A
211 224Right-handed alpha
Helix 29
AD2
A
226 244Right-handed alpha
Helix 30
AD3
A
250 260Right-handed alpha
Helix 31
AD4
A
275 296Right-handed alpha
Helix 32
AD5
A
296 301Right-handed alpha
Helix 33
AD6
C
20 33Right-handed alpha
Helix 34
AD7
C
47 51Right-handed 310
Helix 35
AD8
C
52 68Right-handed alpha
Helix 36
AD9
C
81 96Right-handed alpha
Helix 37
AE1
C
111 125Right-handed alpha
Helix 38
AE2
C
135 140Right-handed alpha
Helix 39
AE3
C
144 155Right-handed alpha
Helix 40
AE4
C
167 178Right-handed alpha
Helix 41
AE5
C
188 190Right-handed 310
Helix 42
AE6
C
191 198Right-handed alpha
Helix 43
AE7
C
206 210Right-handed 310
Helix 44
AE8
C
211 224Right-handed alpha
Helix 45
AE9
C
226 244Right-handed alpha
Helix 46
AF1
C
250 260Right-handed alpha
Helix 47
AF2
C
275 296Right-handed alpha
Helix 48
AF3
C
297 300Right-handed 310
Helix 49
AF4
D
20 33Right-handed alpha
Helix 50
AF5
D
47 51Right-handed 310
Helix 51
AF6
D
52 68Right-handed alpha
Helix 52
AF7
D
81 96Right-handed alpha
Helix 53
AF8
D
111 125Right-handed alpha
Helix 54
AF9
D
135 140Right-handed alpha
Helix 55
AG1
D
144 155Right-handed alpha
Helix 56
AG2
D
167 178Right-handed alpha
Helix 57
AG3
D
188 190Right-handed 310
Helix 58
AG4
D
191 198Right-handed alpha
Helix 59
AG5
D
206 210Right-handed 310
Helix 60
AG6
D
211 224Right-handed alpha
Helix 61
AG7
D
226 244Right-handed alpha
Helix 62
AG8
D
250 260Right-handed alpha
Helix 63
AG9
D
275 296Right-handed alpha
Helix 64
AH1
D
296 301Right-handed alpha
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There are 8 sheets in PDB entry 6T3T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 9first strand
Strand 2
B
38 40parallel
Strand 3
B
72 76parallel
Strand 4
B
99 103parallel
Strand 5
B
130 134parallel
Strand 6
B
158 163parallel
Strand 7
B
183 186parallel
Strand 8
B
202 205parallel
Strand 9
B
5 9parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 15first strand
Strand 2
B
18 19anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 9first strand
Strand 2
A
38 40parallel
Strand 3
A
72 76parallel
Strand 4
A
99 103parallel
Strand 5
A
130 134parallel
Strand 6
A
158 163parallel
Strand 7
A
183 186parallel
Strand 8
A
202 205parallel
Strand 9
A
5 9parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 15first strand
Strand 2
A
18 19anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 9first strand
Strand 2
C
38 40parallel
Strand 3
C
72 76parallel
Strand 4
C
99 103parallel
Strand 5
C
130 134parallel
Strand 6
C
158 163parallel
Strand 7
C
183 186parallel
Strand 8
C
202 205parallel
Strand 9
C
5 9parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
14 15first strand
Strand 2
C
18 19anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
5 9first strand
Strand 2
D
38 40parallel
Strand 3
D
72 76parallel
Strand 4
D
99 103parallel
Strand 5
D
130 134parallel
Strand 6
D
158 163parallel
Strand 7
D
183 186parallel
Strand 8
D
202 205parallel
Strand 9
D
5 9parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
14 15first strand
Strand 2
D
18 19anti-parallel
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