Analysis of interatomic Contacts of Structural Units in PDB entry:
6T3X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6T3X entry

There are 2 chains in PDB entry 6T3X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -5THR 1087
C
 SER 0ILE 1086
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6T3X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 20Right-handed alpha
Helix 2
AA2
A
30 34Right-handed 310
Helix 3
AA3
A
54 67Right-handed alpha
Helix 4
AA4
A
115 123Right-handed alpha
Helix 5
AA5
A
155 170Right-handed alpha
Helix 6
AA6
A
1060 1071Right-handed alpha
Helix 7
AA7
A
1071 1082Right-handed alpha
Helix 8
AA8
C
1 20Right-handed alpha
Helix 9
AA9
C
54 66Right-handed alpha
Helix 10
AB1
C
115 123Right-handed alpha
Helix 11
AB2
C
155 168Right-handed alpha
Helix 12
AB3
C
1060 1071Right-handed alpha
Helix 13
AB4
C
1071 1081Right-handed alpha
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There are 6 sheets in PDB entry 6T3X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 28first strand
Strand 2
A
43 47anti-parallel
Strand 3
A
81 86anti-parallel
Strand 4
A
71 76anti-parallel
Strand 5
A
111 114anti-parallel
Strand 6
A
97 99parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 107first strand
Strand 2
A
143 152anti-parallel
Strand 3
A
130 137anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 107first strand
Strand 2
A
143 152anti-parallel
Strand 3
A
1084 1085anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 28first strand
Strand 2
C
43 47anti-parallel
Strand 3
C
81 86anti-parallel
Strand 4
C
71 76anti-parallel
Strand 5
C
111 114anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
103 106first strand
Strand 2
C
144 153anti-parallel
Strand 3
C
130 137anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
103 106first strand
Strand 2
C
144 153anti-parallel
Strand 3
C
1082 1085anti-parallel
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