Analysis of interatomic Contacts of Structural Units in PDB entry:
6T5E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6T5E entry

There is 1 chain in PDB entry 6T5E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 67VAL 530
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6T5E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
86 92Right-handed 310
Helix 2
AA2
A
93 98Right-handed alpha
Helix 3
AA3
A
109 121Right-handed alpha
Helix 4
AA4
A
121 129Right-handed alpha
Helix 5
AA5
A
157 162Right-handed alpha
Helix 6
AA6
A
165 169Right-handed 310
Helix 7
AA7
A
173 178Right-handed alpha
Helix 8
AA8
A
181 189Right-handed alpha
Helix 9
AA9
A
195 199Right-handed 310
Helix 10
AB1
A
207 212Right-handed alpha
Helix 11
AB2
A
218 230Right-handed alpha
Helix 12
AB3
A
242 248Right-handed alpha
Helix 13
AB4
A
249 254Right-handed alpha
Helix 14
AB5
A
263 270Right-handed alpha
Helix 15
AB6
A
270 280Right-handed alpha
Helix 16
AB7
A
298 304Right-handed alpha
Helix 17
AB8
A
305 308Right-handed 310
Helix 18
AB9
A
334 345Right-handed alpha
Helix 19
AC1
A
349 385Right-handed alpha
Helix 20
AC2
A
418 429Right-handed alpha
Helix 21
AC3
A
430 441Right-handed alpha
Helix 22
AC4
A
453 482Right-handed alpha
Helix 23
AC5
A
488 493Right-handed alpha
Helix 24
AC6
A
496 505Right-handed 310
Helix 25
AC7
A
511 516Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6T5E.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 74first strand
Strand 2
A
84 85anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il