Analysis of interatomic Contacts of Structural Units in PDB entry:
6T5F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6T5F entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 12 chains in PDB entry 6T5F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO -1SER 233
B
 HIS 0GLY 234
C
 PRO -1SER 233
D
 MET 1SER 233
E
 LEU 236GLY 239
E
 THR 241ALA 245
F
 SER 235GLY 239
F
 THR 241ALA 245
G
 LEU 236GLY 239
G
 THR 241CYS 242
H
 GLY 234GLY 239
H
 THR 241CYS 242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 6T5F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 16Right-handed alpha
Helix 2
AA2
A
18 31Right-handed alpha
Helix 3
AA3
A
37 70Right-handed alpha
Helix 4
AA4
A
79 106Right-handed alpha
Helix 5
AA5
A
113 135Right-handed alpha
Helix 6
AA6
A
139 162Right-handed alpha
Helix 7
AA7
A
166 183Right-handed alpha
Helix 8
AA8
A
186 203Right-handed alpha
Helix 9
AA9
A
204 208Right-handed 310
Helix 10
AB1
A
209 232Right-handed alpha
Helix 11
AB2
B
2 16Right-handed alpha
Helix 12
AB3
B
18 31Right-handed alpha
Helix 13
AB4
B
37 69Right-handed alpha
Helix 14
AB5
B
78 107Right-handed alpha
Helix 15
AB6
B
113 135Right-handed alpha
Helix 16
AB7
B
138 162Right-handed alpha
Helix 17
AB8
B
166 183Right-handed alpha
Helix 18
AB9
B
186 203Right-handed alpha
Helix 19
AC1
B
209 232Right-handed alpha
Helix 20
AC2
C
1 16Right-handed alpha
Helix 21
AC3
C
18 31Right-handed alpha
Helix 22
AC4
C
37 69Right-handed alpha
Helix 23
AC5
C
77 106Right-handed alpha
Helix 24
AC6
C
113 135Right-handed alpha
Helix 25
AC7
C
139 162Right-handed alpha
Helix 26
AC8
C
166 183Right-handed alpha
Helix 27
AC9
C
186 204Right-handed alpha
Helix 28
AD1
C
209 211Right-handed 310
Helix 29
AD2
C
212 232Right-handed alpha
Helix 30
AD3
D
2 16Right-handed alpha
Helix 31
AD4
D
18 31Right-handed alpha
Helix 32
AD5
D
37 69Right-handed alpha
Helix 33
AD6
D
78 106Right-handed alpha
Helix 34
AD7
D
113 135Right-handed alpha
Helix 35
AD8
D
136 162Right-handed alpha
Helix 36
AD9
D
166 183Right-handed alpha
Helix 37
AE1
D
186 202Right-handed alpha
Helix 38
AE2
D
209 232Right-handed alpha
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There are no sheets in PDB entry 6T5F
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