Analysis of interatomic Contacts of Structural Units in PDB entry:
6T5X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6T5X entry

There are 2 chains in PDB entry 6T5X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2VAL 244
B
 SER 2VAL 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6T5X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 28Right-handed alpha
Helix 2
AA2
A
38 50Right-handed alpha
Helix 3
AA3
A
62 77Right-handed alpha
Helix 4
AA4
A
94 98Right-handed 310
Helix 5
AA5
A
99 111Right-handed alpha
Helix 6
AA6
A
111 129Right-handed alpha
Helix 7
AA7
A
138 144Right-handed alpha
Helix 8
AA8
A
148 170Right-handed alpha
Helix 9
AA9
A
193 203Right-handed alpha
Helix 10
AB1
A
211 224Right-handed alpha
Helix 11
AB2
A
225 228Right-handed 310
Helix 12
AB3
B
15 28Right-handed alpha
Helix 13
AB4
B
38 50Right-handed alpha
Helix 14
AB5
B
62 77Right-handed alpha
Helix 15
AB6
B
94 98Right-handed 310
Helix 16
AB7
B
99 111Right-handed alpha
Helix 17
AB8
B
111 129Right-handed alpha
Helix 18
AB9
B
138 144Right-handed alpha
Helix 19
AC1
B
148 170Right-handed alpha
Helix 20
AC2
B
186 191Right-handed alpha
Helix 21
AC3
B
193 202Right-handed alpha
Helix 22
AC4
B
211 224Right-handed alpha
Helix 23
AC5
B
225 228Right-handed 310
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There are 2 sheets in PDB entry 6T5X. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 57first strand
Strand 2
A
31 36parallel
Strand 3
A
7 10parallel
Strand 4
A
82 85parallel
Strand 5
A
131 136parallel
Strand 6
A
174 181parallel
Strand 7
A
234 237parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 57first strand
Strand 2
B
31 36parallel
Strand 3
B
7 10parallel
Strand 4
B
82 85parallel
Strand 5
B
131 136parallel
Strand 6
B
174 181parallel
Strand 7
B
234 237parallel
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