Analysis of interatomic Contacts of Structural Units in PDB entry:
6T6P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6T6P entry

There are 4 chains in PDB entry 6T6P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0LEU 244
B
 SER 0LEU 244
C
 SER 0LEU 244
D
 SER 0LEU 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 6T6P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 28Right-handed alpha
Helix 2
AA2
A
40 51Right-handed alpha
Helix 3
AA3
A
64 80Right-handed alpha
Helix 4
AA4
A
101 113Right-handed alpha
Helix 5
AA5
A
113 131Right-handed alpha
Helix 6
AA6
A
140 145Right-handed 310
Helix 7
AA7
A
149 171Right-handed alpha
Helix 8
AA8
A
189 193Right-handed 310
Helix 9
AA9
A
194 204Right-handed alpha
Helix 10
AB1
A
212 225Right-handed alpha
Helix 11
AB2
A
226 229Right-handed 310
Helix 12
AB3
B
15 28Right-handed alpha
Helix 13
AB4
B
40 51Right-handed alpha
Helix 14
AB5
B
64 80Right-handed alpha
Helix 15
AB6
B
101 113Right-handed alpha
Helix 16
AB7
B
113 131Right-handed alpha
Helix 17
AB8
B
140 145Right-handed 310
Helix 18
AB9
B
149 171Right-handed alpha
Helix 19
AC1
B
194 204Right-handed alpha
Helix 20
AC2
B
212 225Right-handed alpha
Helix 21
AC3
B
226 229Right-handed 310
Helix 22
AC4
C
15 28Right-handed alpha
Helix 23
AC5
C
40 51Right-handed alpha
Helix 24
AC6
C
64 80Right-handed alpha
Helix 25
AC7
C
101 113Right-handed alpha
Helix 26
AC8
C
113 131Right-handed alpha
Helix 27
AC9
C
140 145Right-handed 310
Helix 28
AD1
C
149 171Right-handed alpha
Helix 29
AD2
C
189 193Right-handed 310
Helix 30
AD3
C
194 204Right-handed alpha
Helix 31
AD4
C
212 225Right-handed alpha
Helix 32
AD5
C
226 229Right-handed 310
Helix 33
AD6
D
15 28Right-handed alpha
Helix 34
AD7
D
40 51Right-handed alpha
Helix 35
AD8
D
64 80Right-handed alpha
Helix 36
AD9
D
101 113Right-handed alpha
Helix 37
AE1
D
113 131Right-handed alpha
Helix 38
AE2
D
140 145Right-handed 310
Helix 39
AE3
D
149 171Right-handed alpha
Helix 40
AE4
D
194 204Right-handed alpha
Helix 41
AE5
D
212 225Right-handed alpha
Helix 42
AE6
D
226 229Right-handed 310
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There are 4 sheets in PDB entry 6T6P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 59first strand
Strand 2
A
31 36parallel
Strand 3
A
7 11parallel
Strand 4
A
84 87parallel
Strand 5
A
133 138parallel
Strand 6
A
175 182parallel
Strand 7
A
235 238parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 59first strand
Strand 2
B
31 36parallel
Strand 3
B
7 11parallel
Strand 4
B
84 87parallel
Strand 5
B
133 138parallel
Strand 6
B
175 182parallel
Strand 7
B
235 238parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
55 59first strand
Strand 2
C
31 36parallel
Strand 3
C
7 11parallel
Strand 4
C
84 87parallel
Strand 5
C
133 138parallel
Strand 6
C
175 182parallel
Strand 7
C
235 238parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
55 59first strand
Strand 2
D
31 36parallel
Strand 3
D
7 11parallel
Strand 4
D
84 87parallel
Strand 5
D
133 138parallel
Strand 6
D
175 182parallel
Strand 7
D
235 238parallel
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