Analysis of interatomic Contacts of Structural Units in PDB entry:
6T6V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6T6V entry

There is 1 chain in PDB entry 6T6V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2LEU 743
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 39 helices in PDB entry 6T6V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 10Right-handed alpha
Helix 2
AA2
A
10 30Right-handed alpha
Helix 3
AA3
A
51 64Right-handed alpha
Helix 4
AA4
A
65 69Right-handed 310
Helix 5
AA5
A
82 102Right-handed alpha
Helix 6
AA6
A
112 127Right-handed alpha
Helix 7
AA7
A
142 159Right-handed alpha
Helix 8
AA8
A
163 165Right-handed 310
Helix 9
AA9
A
166 171Right-handed alpha
Helix 10
AB1
A
182 199Right-handed alpha
Helix 11
AB2
A
226 253Right-handed alpha
Helix 12
AB3
A
276 281Right-handed alpha
Helix 13
AB4
A
282 309Right-handed alpha
Helix 14
AB5
A
323 355Right-handed alpha
Helix 15
AB6
A
362 390Right-handed alpha
Helix 16
AB7
A
412 435Right-handed alpha
Helix 17
AB8
A
436 438Right-handed 310
Helix 18
AB9
A
444 461Right-handed alpha
Helix 19
AC1
A
462 466Right-handed 310
Helix 20
AC2
A
473 485Right-handed alpha
Helix 21
AC3
A
493 508Right-handed alpha
Helix 22
AC4
A
514 529Right-handed alpha
Helix 23
AC5
A
534 538Right-handed 310
Helix 24
AC6
A
545 555Right-handed alpha
Helix 25
AC7
A
556 560Right-handed 310
Helix 26
AC8
A
573 577Right-handed 310
Helix 27
AC9
A
580 585Right-handed 310
Helix 28
AD1
A
586 601Right-handed alpha
Helix 29
AD2
A
606 611Right-handed alpha
Helix 30
AD3
A
613 619Right-handed alpha
Helix 31
AD4
A
625 637Right-handed alpha
Helix 32
AD5
A
637 651Right-handed alpha
Helix 33
AD6
A
663 670Right-handed alpha
Helix 34
AD7
A
670 681Right-handed alpha
Helix 35
AD8
A
682 697Right-handed alpha
Helix 36
AD9
A
698 703Right-handed alpha
Helix 37
AE1
A
704 709Right-handed alpha
Helix 38
AE2
A
712 719Right-handed alpha
Helix 39
AE3
A
720 742Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 6T6V. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 41first strand
Strand 2
A
47 50anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 72first strand
Strand 2
A
75 76anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il