Analysis of interatomic Contacts of Structural Units in PDB entry:
6T7F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6T7F entry

There are 3 chains in PDB entry 6T7F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 4387ASN 4636
B
 GLY -2MET 147
C
 GLN 2ARG 72
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6T7F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4397 4401Right-handed 310
Helix 2
AA2
A
4414 4424Right-handed alpha
Helix 3
AA3
A
4432 4436Right-handed 310
Helix 4
AA4
A
4446 4448Right-handed 310
Helix 5
AA5
A
4449 4474Right-handed alpha
Helix 6
AA6
A
4479 4484Right-handed alpha
Helix 7
AA7
A
4492 4500Right-handed alpha
Helix 8
AA8
A
4531 4535Right-handed 310
Helix 9
AA9
A
4537 4542Right-handed 310
Helix 10
AB1
A
4579 4585Right-handed alpha
Helix 11
AB2
A
4585 4592Right-handed alpha
Helix 12
AB3
A
4593 4597Right-handed 310
Helix 13
AB4
A
4603 4607Right-handed 310
Helix 14
AB5
A
4632 4636Right-handed alpha
Helix 15
AB6
B
-1 14Right-handed alpha
Helix 16
AB7
B
86 90Right-handed 310
Helix 17
AB8
B
98 112Right-handed alpha
Helix 18
AB9
B
120 130Right-handed alpha
Helix 19
AC1
B
130 146Right-handed alpha
Helix 20
AC2
C
22 35Right-handed alpha
Helix 21
AC3
C
37 39Right-handed 310
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There are 6 sheets in PDB entry 6T7F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4403 4405first strand
Strand 2
A
4411 4413anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4429 4430first strand
Strand 2
A
4501 4505anti-parallel
Strand 3
A
4512 4517anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4557 4559first strand
Strand 2
A
4628 4631anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4570 4572first strand
Strand 2
A
4576 4578anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 25first strand
Strand 2
B
32 38anti-parallel
Strand 3
B
49 55anti-parallel
Strand 4
B
66 69anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 15first strand
Strand 2
C
3 7anti-parallel
Strand 3
C
66 71parallel
Strand 4
C
41 45anti-parallel
Strand 5
C
48 49anti-parallel
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