Analysis of interatomic Contacts of Structural Units in PDB entry:
6T7J

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6T7J entry

There are 3 chains in PDB entry 6T7J (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	MET 1	LEU 632
A	ALA 2	LEU 632
D	TYR 4	LEU 632

There are101 helices in PDB entry 6T7J. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	10	14	Right-handed 310
Helix 2	AA2	B	19	31	Right-handed alpha
Helix 3	AA3	B	34	43	Right-handed alpha
Helix 4	AA4	B	46	51	Right-handed alpha
Helix 5	AA5	B	80	116	Right-handed alpha
Helix 6	AA6	B	126	137	Right-handed alpha
Helix 7	AA7	B	145	163	Right-handed alpha
Helix 8	AA8	B	169	175	Right-handed 310
Helix 9	AA9	B	176	187	Right-handed alpha
Helix 10	AB1	B	192	204	Right-handed alpha
Helix 11	AB2	B	211	228	Right-handed alpha
Helix 12	AB3	B	229	243	Right-handed alpha
Helix 13	AB4	B	253	257	Right-handed 310
Helix 14	AB5	B	270	282	Right-handed alpha
Helix 15	AB6	B	283	293	Right-handed alpha
Helix 16	AB7	B	304	315	Right-handed alpha
Helix 17	AB8	B	321	323	Right-handed 310
Helix 18	AB9	B	324	331	Right-handed alpha
Helix 19	AC1	B	346	353	Right-handed alpha
Helix 20	AC2	B	380	396	Right-handed alpha
Helix 21	AC3	B	397	399	Right-handed 310
Helix 22	AC4	B	400	404	Right-handed 310
Helix 23	AC5	B	418	426	Right-handed alpha
Helix 24	AC6	B	430	440	Right-handed alpha
Helix 25	AC7	B	459	472	Right-handed alpha
Helix 26	AC8	B	479	490	Right-handed alpha
Helix 27	AC9	B	493	500	Right-handed 310
Helix 28	AD1	B	501	512	Right-handed alpha
Helix 29	AD2	B	524	539	Right-handed alpha
Helix 30	AD3	B	542	546	Right-handed 310
Helix 31	AD4	B	557	570	Right-handed alpha
Helix 32	AD5	B	585	594	Right-handed alpha
Helix 33	AD6	B	596	601	Right-handed alpha
Helix 34	AD7	B	609	628	Right-handed alpha
Helix 35	AD8	A	10	14	Right-handed 310
Helix 36	AD9	A	19	31	Right-handed alpha
Helix 37	AE1	A	34	43	Right-handed alpha
Helix 38	AE2	A	46	51	Right-handed alpha
Helix 39	AE3	A	80	116	Right-handed alpha
Helix 40	AE4	A	126	137	Right-handed alpha
Helix 41	AE5	A	145	161	Right-handed alpha
Helix 42	AE6	A	169	175	Right-handed 310
Helix 43	AE7	A	176	187	Right-handed alpha
Helix 44	AE8	A	192	204	Right-handed alpha
Helix 45	AE9	A	211	228	Right-handed alpha
Helix 46	AF1	A	229	243	Right-handed alpha
Helix 47	AF2	A	253	257	Right-handed 310
Helix 48	AF3	A	270	282	Right-handed alpha
Helix 49	AF4	A	283	293	Right-handed alpha
Helix 50	AF5	A	304	315	Right-handed alpha
Helix 51	AF6	A	321	323	Right-handed 310
Helix 52	AF7	A	324	331	Right-handed alpha
Helix 53	AF8	A	346	355	Right-handed alpha
Helix 54	AF9	A	380	394	Right-handed alpha
Helix 55	AG1	A	395	399	Right-handed 310
Helix 56	AG2	A	400	404	Right-handed 310
Helix 57	AG3	A	418	426	Right-handed alpha
Helix 58	AG4	A	430	440	Right-handed alpha
Helix 59	AG5	A	459	471	Right-handed alpha
Helix 60	AG6	A	479	490	Right-handed alpha
Helix 61	AG7	A	493	500	Right-handed 310
Helix 62	AG8	A	501	512	Right-handed alpha
Helix 63	AG9	A	524	539	Right-handed alpha
Helix 64	AH1	A	542	546	Right-handed 310
Helix 65	AH2	A	557	570	Right-handed alpha
Helix 66	AH3	A	585	594	Right-handed alpha
Helix 67	AH4	A	596	601	Right-handed alpha
Helix 68	AH5	A	609	628	Right-handed alpha
Helix 69	AH6	D	10	15	Right-handed alpha
Helix 70	AH7	D	19	30	Right-handed alpha
Helix 71	AH8	D	34	43	Right-handed alpha
Helix 72	AH9	D	46	52	Right-handed alpha
Helix 73	AI1	D	80	116	Right-handed alpha
Helix 74	AI2	D	126	137	Right-handed alpha
Helix 75	AI3	D	145	160	Right-handed alpha
Helix 76	AI4	D	169	175	Right-handed 310
Helix 77	AI5	D	176	187	Right-handed alpha
Helix 78	AI6	D	192	204	Right-handed alpha
Helix 79	AI7	D	211	229	Right-handed alpha
Helix 80	AI8	D	229	243	Right-handed alpha
Helix 81	AI9	D	253	257	Right-handed 310
Helix 82	AJ1	D	270	282	Right-handed alpha
Helix 83	AJ2	D	283	293	Right-handed alpha
Helix 84	AJ3	D	304	315	Right-handed alpha
Helix 85	AJ4	D	324	331	Right-handed alpha
Helix 86	AJ5	D	346	353	Right-handed alpha
Helix 87	AJ6	D	380	396	Right-handed alpha
Helix 88	AJ7	D	397	399	Right-handed 310
Helix 89	AJ8	D	400	404	Right-handed 310
Helix 90	AJ9	D	418	427	Right-handed alpha
Helix 91	AK1	D	430	440	Right-handed alpha
Helix 92	AK2	D	459	471	Right-handed alpha
Helix 93	AK3	D	479	490	Right-handed alpha
Helix 94	AK4	D	495	500	Right-handed 310
Helix 95	AK5	D	501	512	Right-handed alpha
Helix 96	AK6	D	524	539	Right-handed alpha
Helix 97	AK7	D	542	546	Right-handed 310
Helix 98	AK8	D	557	570	Right-handed alpha
Helix 99	AK9	D	585	594	Right-handed alpha
Helix 100	AL1	D	596	601	Right-handed alpha
Helix 101	AL2	D	609	628	Right-handed alpha

There are 12 sheets in PDB entry 6T7J. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	55	first strand
Strand 2	B	63	64	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	248	252	first strand
Strand 2	B	411	415	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	318	320	first strand
Strand 2	B	297	303	parallel
Strand 3	B	261	268	parallel
Strand 4	B	336	339	parallel
Strand 5	B	358	361	parallel
Strand 6	B	372	373	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	516	518	first strand
Strand 2	B	474	478	parallel
Strand 3	B	444	448	parallel
Strand 4	B	548	552	parallel
Strand 5	B	574	576	parallel
Strand 6	B	604	606	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	63	64	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	248	252	first strand
Strand 2	A	411	415	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	318	320	first strand
Strand 2	A	298	303	parallel
Strand 3	A	262	266	parallel
Strand 4	A	334	339	parallel
Strand 5	A	358	361	parallel
Strand 6	A	372	373	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	516	518	first strand
Strand 2	A	474	478	parallel
Strand 3	A	444	448	parallel
Strand 4	A	548	552	parallel
Strand 5	A	574	576	parallel
Strand 6	A	604	606	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	54	55	first strand
Strand 2	D	63	64	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	248	252	first strand
Strand 2	D	411	415	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	318	320	first strand
Strand 2	D	298	303	parallel
Strand 3	D	262	267	parallel
Strand 4	D	334	339	parallel
Strand 5	D	358	361	parallel
Strand 6	D	372	373	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	516	518	first strand
Strand 2	D	474	478	parallel
Strand 3	D	444	448	parallel
Strand 4	D	548	552	parallel
Strand 5	D	574	576	parallel
Strand 6	D	604	606	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6T7J

Analysis of interatomic Contacts of Structural Units in PDB entry:
6T7J