Analysis of interatomic Contacts of Structural Units in PDB entry:
6T7K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6T7K entry

There is 1 chain in PDB entry 6T7K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 250TYR 746
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6T7K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
261 273Right-handed alpha
Helix 2
AA2
A
288 309Right-handed alpha
Helix 3
AA3
A
322 326Right-handed alpha
Helix 4
AA4
A
328 336Right-handed alpha
Helix 5
AA5
A
337 339Right-handed 310
Helix 6
AA6
A
360 366Right-handed alpha
Helix 7
AA7
A
367 372Right-handed alpha
Helix 8
AA8
A
374 378Right-handed 310
Helix 9
AA9
A
416 438Right-handed alpha
Helix 10
AB1
A
484 491Right-handed alpha
Helix 11
AB2
A
513 524Right-handed alpha
Helix 12
AB3
A
532 536Right-handed 310
Helix 13
AB4
A
551 569Right-handed alpha
Helix 14
AB5
A
582 592Right-handed alpha
Helix 15
AB6
A
602 608Right-handed alpha
Helix 16
AB7
A
628 655Right-handed alpha
Helix 17
AB8
A
661 663Right-handed 310
Helix 18
AB9
A
664 671Right-handed alpha
Helix 19
AC1
A
683 697Right-handed alpha
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There are 6 sheets in PDB entry 6T7K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
276 277first strand
Strand 2
A
286 287anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 313first strand
Strand 2
A
380 389parallel
Strand 3
A
404 414anti-parallel
Strand 4
A
505 512anti-parallel
Strand 5
A
472 483anti-parallel
Strand 6
A
459 467anti-parallel
Strand 7
A
444 447anti-parallel
Strand 8
A
712 717anti-parallel
Strand 9
A
738 743anti-parallel
Strand 10
A
674 679anti-parallel
Strand 11
A
656 658parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
319 321first strand
Strand 2
A
348 356anti-parallel
Strand 3
A
341 345anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
493 495first strand
Strand 2
A
501 503anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
529 530first strand
Strand 2
A
593 594parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
573 575first strand
Strand 2
A
540 544parallel
Strand 3
A
597 601parallel
Strand 4
A
610 615anti-parallel
Strand 5
A
621 625anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il