Analysis of interatomic Contacts of Structural Units in PDB entry:
6T8X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6T8X entry

There are 6 chains in PDB entry 6T8X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 44	LYS 330
B	GLN 45	THR 329
C	PRO 44	THR 329
D	PRO 44	VAL 331
E	GLN 45	THR 329
F	GLN 45	THR 329

There are 82 helices in PDB entry 6T8X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	58	61	Right-handed 310
Helix 2	AA2	A	98	113	Right-handed alpha
Helix 3	AA3	A	145	154	Right-handed alpha
Helix 4	AA4	A	155	157	Right-handed 310
Helix 5	AA5	A	159	180	Right-handed alpha
Helix 6	AA6	A	226	230	Right-handed 310
Helix 7	AA7	A	231	236	Right-handed alpha
Helix 8	AA8	A	242	259	Right-handed alpha
Helix 9	AA9	A	272	282	Right-handed alpha
Helix 10	AB1	A	287	292	Right-handed alpha
Helix 11	AB2	A	295	306	Right-handed alpha
Helix 12	AB3	A	315	321	Right-handed alpha
Helix 13	AB4	A	322	327	Right-handed alpha
Helix 14	AB5	A	328	330	Right-handed 310
Helix 15	AB6	B	58	61	Right-handed 310
Helix 16	AB7	B	98	113	Right-handed alpha
Helix 17	AB8	B	145	154	Right-handed alpha
Helix 18	AB9	B	155	157	Right-handed 310
Helix 19	AC1	B	159	180	Right-handed alpha
Helix 20	AC2	B	188	190	Right-handed 310
Helix 21	AC3	B	226	230	Right-handed 310
Helix 22	AC4	B	231	236	Right-handed alpha
Helix 23	AC5	B	242	259	Right-handed alpha
Helix 24	AC6	B	272	282	Right-handed alpha
Helix 25	AC7	B	287	292	Right-handed alpha
Helix 26	AC8	B	295	306	Right-handed alpha
Helix 27	AC9	B	315	321	Right-handed alpha
Helix 28	AD1	B	322	327	Right-handed alpha
Helix 29	AD2	C	58	61	Right-handed 310
Helix 30	AD3	C	98	113	Right-handed alpha
Helix 31	AD4	C	145	154	Right-handed alpha
Helix 32	AD5	C	155	157	Right-handed 310
Helix 33	AD6	C	159	180	Right-handed alpha
Helix 34	AD7	C	226	230	Right-handed 310
Helix 35	AD8	C	231	236	Right-handed alpha
Helix 36	AD9	C	242	259	Right-handed alpha
Helix 37	AE1	C	272	282	Right-handed alpha
Helix 38	AE2	C	287	292	Right-handed alpha
Helix 39	AE3	C	295	306	Right-handed alpha
Helix 40	AE4	C	315	321	Right-handed alpha
Helix 41	AE5	C	322	327	Right-handed alpha
Helix 42	AE6	D	58	61	Right-handed 310
Helix 43	AE7	D	98	113	Right-handed alpha
Helix 44	AE8	D	145	154	Right-handed alpha
Helix 45	AE9	D	155	157	Right-handed 310
Helix 46	AF1	D	159	180	Right-handed alpha
Helix 47	AF2	D	188	190	Right-handed 310
Helix 48	AF3	D	226	230	Right-handed 310
Helix 49	AF4	D	231	236	Right-handed alpha
Helix 50	AF5	D	241	259	Right-handed alpha
Helix 51	AF6	D	272	282	Right-handed alpha
Helix 52	AF7	D	287	292	Right-handed alpha
Helix 53	AF8	D	295	306	Right-handed alpha
Helix 54	AF9	D	315	321	Right-handed alpha
Helix 55	AG1	D	322	327	Right-handed alpha
Helix 56	AG2	E	58	61	Right-handed 310
Helix 57	AG3	E	98	113	Right-handed alpha
Helix 58	AG4	E	145	154	Right-handed alpha
Helix 59	AG5	E	155	157	Right-handed 310
Helix 60	AG6	E	159	180	Right-handed alpha
Helix 61	AG7	E	226	230	Right-handed 310
Helix 62	AG8	E	231	236	Right-handed alpha
Helix 63	AG9	E	242	259	Right-handed alpha
Helix 64	AH1	E	272	282	Right-handed alpha
Helix 65	AH2	E	287	292	Right-handed alpha
Helix 66	AH3	E	295	306	Right-handed alpha
Helix 67	AH4	E	315	321	Right-handed alpha
Helix 68	AH5	E	322	327	Right-handed alpha
Helix 69	AH6	F	58	61	Right-handed 310
Helix 70	AH7	F	98	113	Right-handed alpha
Helix 71	AH8	F	145	154	Right-handed alpha
Helix 72	AH9	F	155	157	Right-handed 310
Helix 73	AI1	F	159	180	Right-handed alpha
Helix 74	AI2	F	188	190	Right-handed 310
Helix 75	AI3	F	226	230	Right-handed 310
Helix 76	AI4	F	231	236	Right-handed alpha
Helix 77	AI5	F	242	259	Right-handed alpha
Helix 78	AI6	F	272	282	Right-handed alpha
Helix 79	AI7	F	287	292	Right-handed alpha
Helix 80	AI8	F	295	306	Right-handed alpha
Helix 81	AI9	F	315	321	Right-handed alpha
Helix 82	AJ1	F	322	327	Right-handed alpha

There are 18 sheets in PDB entry 6T8X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	72	first strand
Strand 2	A	77	83	anti-parallel
Strand 3	A	89	96	anti-parallel
Strand 4	A	131	139	anti-parallel
Strand 5	A	120	128	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	182	183	first strand
Strand 2	A	212	213	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	194	first strand
Strand 2	A	203	205	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	50	first strand
Strand 2	F	120	128	anti-parallel
Strand 3	F	131	138	anti-parallel
Strand 4	F	89	96	anti-parallel
Strand 5	F	77	83	anti-parallel
Strand 6	F	63	72	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	72	first strand
Strand 2	B	77	83	anti-parallel
Strand 3	B	89	96	anti-parallel
Strand 4	B	131	138	anti-parallel
Strand 5	B	120	128	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	182	183	first strand
Strand 2	B	212	213	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	194	first strand
Strand 2	B	203	205	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	49	50	first strand
Strand 2	E	120	128	anti-parallel
Strand 3	E	131	138	anti-parallel
Strand 4	E	89	96	anti-parallel
Strand 5	E	77	83	anti-parallel
Strand 6	E	63	72	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	63	72	first strand
Strand 2	C	77	83	anti-parallel
Strand 3	C	89	96	anti-parallel
Strand 4	C	131	138	anti-parallel
Strand 5	C	120	128	anti-parallel
Strand 6	D	49	50	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	182	183	first strand
Strand 2	C	212	213	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	192	194	first strand
Strand 2	C	203	205	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	63	72	first strand
Strand 2	D	77	83	anti-parallel
Strand 3	D	89	96	anti-parallel
Strand 4	D	131	138	anti-parallel
Strand 5	D	120	128	anti-parallel
Strand 6	E	49	50	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	182	183	first strand
Strand 2	D	212	213	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	192	194	first strand
Strand 2	D	203	205	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	182	183	first strand
Strand 2	E	212	213	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	192	194	first strand
Strand 2	E	203	205	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	182	183	first strand
Strand 2	F	212	213	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	192	194	first strand
Strand 2	F	203	205	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6T8X

Analysis of interatomic Contacts of Structural Units in PDB entry:
6T8X