Analysis of interatomic Contacts of Structural Units in PDB entry:
6T9C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6T9C entry

There are 2 chains in PDB entry 6T9C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 207LYS 474
B
 GLU 207TYR 473
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6T9C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
207 226Right-handed alpha
Helix 2
AA2
A
229 238Right-handed alpha
Helix 3
AA3
A
251 256Right-handed alpha
Helix 4
AA4
A
278 302Right-handed alpha
Helix 5
AA5
A
305 309Right-handed 310
Helix 6
AA6
A
310 333Right-handed alpha
Helix 7
AA7
A
342 344Right-handed 310
Helix 8
AA8
A
350 355Right-handed alpha
Helix 9
AA9
A
356 363Right-handed 310
Helix 10
AB1
A
364 376Right-handed alpha
Helix 11
AB2
A
380 393Right-handed alpha
Helix 12
AB3
A
402 425Right-handed alpha
Helix 13
AB4
A
430 460Right-handed alpha
Helix 14
AB5
A
466 473Right-handed alpha
Helix 15
AB6
B
208 226Right-handed alpha
Helix 16
AB7
B
229 237Right-handed alpha
Helix 17
AB8
B
251 256Right-handed alpha
Helix 18
AB9
B
278 301Right-handed alpha
Helix 19
AC1
B
310 332Right-handed alpha
Helix 20
AC2
B
342 344Right-handed 310
Helix 21
AC3
B
350 355Right-handed alpha
Helix 22
AC4
B
358 363Right-handed 310
Helix 23
AC5
B
364 376Right-handed alpha
Helix 24
AC6
B
380 393Right-handed alpha
Helix 25
AC7
B
402 425Right-handed alpha
Helix 26
AC8
B
430 457Right-handed alpha
Helix 27
AC9
B
467 473Right-handed alpha
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There are 2 sheets in PDB entry 6T9C. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 249first strand
Strand 2
A
346 349parallel
Strand 3
A
338 341anti-parallel
Strand 4
A
334 335anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 249first strand
Strand 2
B
346 349parallel
Strand 3
B
338 341anti-parallel
Strand 4
B
334 335anti-parallel
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