Analysis of interatomic Contacts of Structural Units in PDB entry:
6TA4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TA4 entry

There are 3 chains in PDB entry 6TA4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	MET 1	THR 429
A	MET 1	ASP 438
K	LYS 17	ASN 366

There are 41 helices in PDB entry 6TA4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	10	29	Right-handed alpha
Helix 2	AA2	B	40	51	Right-handed alpha
Helix 3	AA3	B	69	79	Right-handed alpha
Helix 4	AA4	B	100	127	Right-handed alpha
Helix 5	AA5	B	141	159	Right-handed alpha
Helix 6	AA6	B	179	196	Right-handed alpha
Helix 7	AA7	B	204	216	Right-handed alpha
Helix 8	AA8	B	221	242	Right-handed alpha
Helix 9	AA9	B	249	258	Right-handed alpha
Helix 10	AB1	B	275	282	Right-handed alpha
Helix 11	AB2	B	285	295	Right-handed alpha
Helix 12	AB3	B	322	337	Right-handed alpha
Helix 13	AB4	B	371	392	Right-handed alpha
Helix 14	AB5	B	394	402	Right-handed alpha
Helix 15	AB6	B	404	428	Right-handed alpha
Helix 16	AB7	A	9	29	Right-handed alpha
Helix 17	AB8	A	46	53	Right-handed alpha
Helix 18	AB9	A	71	81	Right-handed alpha
Helix 19	AC1	A	81	87	Right-handed alpha
Helix 20	AC2	A	102	129	Right-handed alpha
Helix 21	AC3	A	143	162	Right-handed alpha
Helix 22	AC4	A	181	198	Right-handed alpha
Helix 23	AC5	A	205	218	Right-handed alpha
Helix 24	AC6	A	223	244	Right-handed alpha
Helix 25	AC7	A	251	260	Right-handed alpha
Helix 26	AC8	A	277	284	Right-handed alpha
Helix 27	AC9	A	287	297	Right-handed alpha
Helix 28	AD1	A	324	338	Right-handed alpha
Helix 29	AD2	A	381	402	Right-handed alpha
Helix 30	AD3	A	404	412	Right-handed alpha
Helix 31	AD4	A	414	437	Right-handed alpha
Helix 32	AD5	K	29	36	Right-handed alpha
Helix 33	AD6	K	77	96	Right-handed alpha
Helix 34	AD7	K	110	117	Right-handed alpha
Helix 35	AD8	K	120	124	Right-handed 310
Helix 36	AD9	K	134	151	Right-handed alpha
Helix 37	AE1	K	206	221	Right-handed alpha
Helix 38	AE2	K	271	276	Right-handed alpha
Helix 39	AE3	K	278	302	Right-handed alpha
Helix 40	AE4	K	314	324	Right-handed alpha
Helix 41	AE5	K	342	359	Right-handed alpha

There are 10 sheets in PDB entry 6TA4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	7	9	first strand
Strand 2	B	134	137	parallel
Strand 3	B	165	170	parallel
Strand 4	B	199	203	parallel
Strand 5	B	265	266	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	54	first strand
Strand 2	B	58	60	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	317	first strand
Strand 2	B	365	369	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	7	8	first strand
Strand 2	A	66	69	parallel
Strand 3	A	92	94	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	137	first strand
Strand 2	A	167	168	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	315	319	first strand
Strand 2	A	375	379	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	23	25	first strand
Strand 2	K	331	336	parallel
Strand 3	K	99	104	parallel
Strand 4	K	254	265	parallel
Strand 5	K	237	248	anti-parallel
Strand 6	K	153	164	anti-parallel
Strand 7	K	167	169	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	23	25	first strand
Strand 2	K	331	336	parallel
Strand 3	K	99	104	parallel
Strand 4	K	254	265	parallel
Strand 5	K	237	248	anti-parallel
Strand 6	K	153	164	anti-parallel
Strand 7	K	202	204	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	49	52	first strand
Strand 2	K	64	67	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	183	185	first strand
Strand 2	K	195	197	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6TA4

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TA4