Analysis of interatomic Contacts of Structural Units in PDB entry:
6TA8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TA8 entry

There are 2 chains in PDB entry 6TA8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 6LYS 449
B
 SER 3GLU 451
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6TA8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 27Right-handed alpha
Helix 2
AA2
A
48 63Right-handed alpha
Helix 3
AA3
A
64 66Right-handed 310
Helix 4
AA4
A
72 76Right-handed 310
Helix 5
AA5
A
101 115Right-handed alpha
Helix 6
AA6
A
145 147Right-handed 310
Helix 7
AA7
A
148 168Right-handed alpha
Helix 8
AA8
A
180 193Right-handed alpha
Helix 9
AA9
A
196 199Right-handed 310
Helix 10
AB1
A
200 210Right-handed alpha
Helix 11
AB2
A
226 228Right-handed 310
Helix 12
AB3
A
238 248Right-handed alpha
Helix 13
AB4
A
249 254Right-handed alpha
Helix 14
AB5
A
256 274Right-handed alpha
Helix 15
AB6
A
318 332Right-handed alpha
Helix 16
AB7
A
333 337Right-handed 310
Helix 17
AB8
A
338 346Right-handed alpha
Helix 18
AB9
A
424 447Right-handed alpha
Helix 19
AC1
B
18 27Right-handed alpha
Helix 20
AC2
B
48 63Right-handed alpha
Helix 21
AC3
B
64 66Right-handed 310
Helix 22
AC4
B
102 115Right-handed alpha
Helix 23
AC5
B
145 147Right-handed 310
Helix 24
AC6
B
148 168Right-handed alpha
Helix 25
AC7
B
180 193Right-handed alpha
Helix 26
AC8
B
194 199Right-handed alpha
Helix 27
AC9
B
200 211Right-handed alpha
Helix 28
AD1
B
226 228Right-handed 310
Helix 29
AD2
B
238 248Right-handed alpha
Helix 30
AD3
B
249 252Right-handed 310
Helix 31
AD4
B
256 274Right-handed alpha
Helix 32
AD5
B
318 332Right-handed alpha
Helix 33
AD6
B
333 337Right-handed 310
Helix 34
AD7
B
338 346Right-handed alpha
Helix 35
AD8
B
374 378Right-handed 310
Helix 36
AD9
B
424 451Right-handed alpha
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There are 6 sheets in PDB entry 6TA8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
78 81anti-parallel
Strand 3
A
68 71anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 95first strand
Strand 2
A
125 132parallel
Strand 3
A
135 143anti-parallel
Strand 4
A
36 43anti-parallel
Strand 5
A
381 382anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 236first strand
Strand 2
A
411 419anti-parallel
Strand 3
A
401 408anti-parallel
Strand 4
A
363 370parallel
Strand 5
A
277 284parallel
Strand 6
A
305 312anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 15first strand
Strand 2
B
76 81anti-parallel
Strand 3
B
68 73anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 95first strand
Strand 2
B
125 132parallel
Strand 3
B
135 143anti-parallel
Strand 4
B
36 43anti-parallel
Strand 5
B
381 382anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
230 236first strand
Strand 2
B
411 419anti-parallel
Strand 3
B
401 408anti-parallel
Strand 4
B
363 371parallel
Strand 5
B
277 284parallel
Strand 6
B
305 312anti-parallel
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