Analysis of interatomic Contacts of Structural Units in PDB entry:
6TB4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TB4 entry

There are 13 chains in PDB entry 6TB4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
M	SER 61	MET 240
A	TYR 159	ASP 364
C	HIS 237	PRO 311
F	LYS 64	LYS 336
D	MET 15	GLN 339
E	GLY 817	LEU 1001
J	THR 58	TYR 216
K	THR 430	ASN 607
G	ALA 43	GLY 722
H	SER 13	PHE 482
I	VAL 12	LEU 139
L	VAL 4	LEU 3825
B	UNK 398	UNK 557

There are255 helices in PDB entry 6TB4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	M	81	90	Right-handed alpha
Helix 2	AA2	M	128	143	Right-handed alpha
Helix 3	AA3	M	171	177	Right-handed alpha
Helix 4	AA4	M	220	237	Right-handed alpha
Helix 5	AA5	A	160	169	Right-handed alpha
Helix 6	AA6	A	172	179	Right-handed alpha
Helix 7	AA7	A	193	200	Right-handed alpha
Helix 8	AA8	A	222	230	Right-handed alpha
Helix 9	AA9	A	242	258	Right-handed alpha
Helix 10	AB1	A	266	291	Right-handed alpha
Helix 11	AB2	A	331	342	Right-handed alpha
Helix 12	AB3	A	350	356	Right-handed alpha
Helix 13	AB4	C	238	244	Right-handed alpha
Helix 14	AB5	C	258	277	Right-handed alpha
Helix 15	AB6	F	69	75	Right-handed alpha
Helix 16	AB7	F	107	117	Right-handed alpha
Helix 17	AB8	F	124	132	Right-handed alpha
Helix 18	AB9	F	194	203	Right-handed alpha
Helix 19	AC1	F	213	230	Right-handed alpha
Helix 20	AC2	F	296	301	Right-handed alpha
Helix 21	AC3	F	325	336	Right-handed alpha
Helix 22	AC4	D	16	26	Right-handed alpha
Helix 23	AC5	D	31	61	Right-handed alpha
Helix 24	AC6	D	66	75	Right-handed alpha
Helix 25	AC7	D	78	89	Right-handed alpha
Helix 26	AC8	D	186	197	Right-handed alpha
Helix 27	AC9	D	202	212	Right-handed alpha
Helix 28	AD1	D	213	218	Right-handed 310
Helix 29	AD2	D	219	227	Right-handed alpha
Helix 30	AD3	D	238	268	Right-handed alpha
Helix 31	AD4	D	305	317	Right-handed alpha
Helix 32	AD5	E	818	845	Right-handed alpha
Helix 33	AD6	E	882	898	Right-handed alpha
Helix 34	AD7	E	907	935	Right-handed alpha
Helix 35	AD8	E	951	963	Right-handed alpha
Helix 36	AD9	E	968	1000	Right-handed alpha
Helix 37	AE1	J	59	66	Right-handed alpha
Helix 38	AE2	J	76	87	Right-handed alpha
Helix 39	AE3	J	94	121	Right-handed alpha
Helix 40	AE4	J	195	206	Right-handed alpha
Helix 41	AE5	K	505	512	Right-handed alpha
Helix 42	AE6	K	525	550	Right-handed alpha
Helix 43	AE7	K	559	568	Right-handed alpha
Helix 44	AE8	K	592	606	Right-handed alpha
Helix 45	AE9	G	44	57	Right-handed alpha
Helix 46	AF1	G	61	69	Right-handed alpha
Helix 47	AF2	G	105	120	Right-handed alpha
Helix 48	AF3	G	125	130	Right-handed alpha
Helix 49	AF4	G	133	148	Right-handed alpha
Helix 50	AF5	G	149	161	Right-handed alpha
Helix 51	AF6	G	170	177	Right-handed alpha
Helix 52	AF7	G	180	187	Right-handed alpha
Helix 53	AF8	G	188	196	Right-handed alpha
Helix 54	AF9	G	204	212	Right-handed alpha
Helix 55	AG1	G	222	233	Right-handed alpha
Helix 56	AG2	G	353	367	Right-handed alpha
Helix 57	AG3	H	21	31	Right-handed alpha
Helix 58	AG4	H	36	63	Right-handed alpha
Helix 59	AG5	H	71	81	Right-handed alpha
Helix 60	AG6	H	218	233	Right-handed alpha
Helix 61	AG7	H	240	254	Right-handed alpha
Helix 62	AG8	H	257	260	Right-handed 310
Helix 63	AG9	H	261	276	Right-handed alpha
Helix 64	AH1	H	279	296	Right-handed alpha
Helix 65	AH2	H	304	318	Right-handed alpha
Helix 66	AH3	H	332	351	Right-handed alpha
Helix 67	AH4	H	357	372	Right-handed alpha
Helix 68	AH5	H	377	390	Right-handed alpha
Helix 69	AH6	H	394	411	Right-handed alpha
Helix 70	AH7	H	415	431	Right-handed alpha
Helix 71	AH8	H	451	458	Right-handed alpha
Helix 72	AH9	H	464	469	Right-handed alpha
Helix 73	AI1	H	473	481	Right-handed alpha
Helix 74	AI2	I	13	20	Right-handed alpha
Helix 75	AI3	I	21	23	Right-handed 310
Helix 76	AI4	I	30	58	Right-handed alpha
Helix 77	AI5	I	77	89	Right-handed alpha
Helix 78	AI6	I	98	110	Right-handed alpha
Helix 79	AI7	L	5	13	Right-handed alpha
Helix 80	AI8	L	21	36	Right-handed alpha
Helix 81	AI9	L	44	60	Right-handed alpha
Helix 82	AJ1	L	69	85	Right-handed alpha
Helix 83	AJ2	L	90	102	Right-handed alpha
Helix 84	AJ3	L	112	127	Right-handed alpha
Helix 85	AJ4	L	135	157	Right-handed alpha
Helix 86	AJ5	L	188	203	Right-handed alpha
Helix 87	AJ6	L	208	219	Right-handed alpha
Helix 88	AJ7	L	264	290	Right-handed alpha
Helix 89	AJ8	L	302	307	Right-handed alpha
Helix 90	AJ9	L	316	331	Right-handed alpha
Helix 91	AK1	L	333	338	Right-handed alpha
Helix 92	AK2	L	356	361	Right-handed alpha
Helix 93	AK3	L	363	379	Right-handed alpha
Helix 94	AK4	L	383	394	Right-handed alpha
Helix 95	AK5	L	405	418	Right-handed alpha
Helix 96	AK6	L	418	423	Right-handed alpha
Helix 97	AK7	L	429	434	Right-handed alpha
Helix 98	AK8	L	434	452	Right-handed alpha
Helix 99	AK9	L	452	457	Right-handed alpha
Helix 100	AL1	L	557	579	Right-handed alpha
Helix 101	AL2	L	604	609	Right-handed alpha
Helix 102	AL3	L	611	621	Right-handed alpha
Helix 103	AL4	L	622	625	Right-handed 310
Helix 104	AL5	L	654	669	Right-handed alpha
Helix 105	AL6	L	677	682	Right-handed alpha
Helix 106	AL7	L	682	693	Right-handed alpha
Helix 107	AL8	L	694	696	Right-handed 310
Helix 108	AL9	L	697	704	Right-handed alpha
Helix 109	AM1	L	709	724	Right-handed alpha
Helix 110	AM2	L	725	729	Right-handed 310
Helix 111	AM3	L	732	751	Right-handed alpha
Helix 112	AM4	L	764	777	Right-handed alpha
Helix 113	AM5	L	783	796	Right-handed alpha
Helix 114	AM6	L	802	806	Right-handed 310
Helix 115	AM7	L	808	817	Right-handed alpha
Helix 116	AM8	L	831	841	Right-handed alpha
Helix 117	AM9	L	852	857	Right-handed 310
Helix 118	AN1	L	859	866	Right-handed alpha
Helix 119	AN2	L	870	884	Right-handed alpha
Helix 120	AN3	L	886	895	Right-handed alpha
Helix 121	AN4	L	897	906	Right-handed alpha
Helix 122	AN5	L	917	929	Right-handed alpha
Helix 123	AN6	L	973	982	Right-handed alpha
Helix 124	AN7	L	987	1007	Right-handed alpha
Helix 125	AN8	L	1014	1021	Right-handed alpha
Helix 126	AN9	L	1053	1055	Right-handed 310
Helix 127	AO1	L	1056	1068	Right-handed alpha
Helix 128	AO2	L	1069	1071	Right-handed 310
Helix 129	AO3	L	1074	1092	Right-handed alpha
Helix 130	AO4	L	1123	1133	Right-handed alpha
Helix 131	AO5	L	1136	1158	Right-handed alpha
Helix 132	AO6	L	1168	1180	Right-handed alpha
Helix 133	AO7	L	1185	1199	Right-handed alpha
Helix 134	AO8	L	1208	1213	Right-handed alpha
Helix 135	AO9	L	1213	1227	Right-handed alpha
Helix 136	AP1	L	1234	1249	Right-handed alpha
Helix 137	AP2	L	1263	1270	Right-handed alpha
Helix 138	AP3	L	1281	1297	Right-handed alpha
Helix 139	AP4	L	1301	1306	Right-handed alpha
Helix 140	AP5	L	1309	1320	Right-handed alpha
Helix 141	AP6	L	1328	1341	Right-handed alpha
Helix 142	AP7	L	1351	1364	Right-handed alpha
Helix 143	AP8	L	1383	1403	Right-handed alpha
Helix 144	AP9	L	1407	1412	Right-handed alpha
Helix 145	AQ1	L	1416	1427	Right-handed alpha
Helix 146	AQ2	L	1433	1444	Right-handed alpha
Helix 147	AQ3	L	1455	1469	Right-handed alpha
Helix 148	AQ4	L	1476	1487	Right-handed alpha
Helix 149	AQ5	L	1497	1510	Right-handed alpha
Helix 150	AQ6	L	1511	1515	Right-handed 310
Helix 151	AQ7	L	1527	1537	Right-handed alpha
Helix 152	AQ8	L	1538	1542	Right-handed 310
Helix 153	AQ9	L	1550	1563	Right-handed alpha
Helix 154	AR1	L	1570	1573	Right-handed 310
Helix 155	AR2	L	1574	1583	Right-handed alpha
Helix 156	AR3	L	1583	1592	Right-handed alpha
Helix 157	AR4	L	1597	1610	Right-handed alpha
Helix 158	AR5	L	1613	1623	Right-handed alpha
Helix 159	AR6	L	1624	1629	Right-handed alpha
Helix 160	AR7	L	1630	1633	Right-handed 310
Helix 161	AR8	L	1643	1656	Right-handed alpha
Helix 162	AR9	L	1666	1683	Right-handed alpha
Helix 163	AS1	L	1693	1708	Right-handed alpha
Helix 164	AS2	L	1710	1714	Right-handed 310
Helix 165	AS3	L	1724	1728	Right-handed 310
Helix 166	AS4	L	1742	1746	Right-handed 310
Helix 167	AS5	L	1755	1767	Right-handed alpha
Helix 168	AS6	L	1777	1783	Right-handed 310
Helix 169	AS7	L	1784	1795	Right-handed alpha
Helix 170	AS8	L	1812	1820	Right-handed alpha
Helix 171	AS9	L	1836	1854	Right-handed alpha
Helix 172	AT1	L	1859	1864	Right-handed alpha
Helix 173	AT2	L	1865	1870	Right-handed alpha
Helix 174	AT3	L	1871	1874	Right-handed 310
Helix 175	AT4	L	1882	1893	Right-handed alpha
Helix 176	AT5	L	1902	1907	Right-handed alpha
Helix 177	AT6	L	1917	1927	Right-handed alpha
Helix 178	AT7	L	1928	1933	Right-handed alpha
Helix 179	AT8	L	1943	1949	Right-handed alpha
Helix 180	AT9	L	1961	1968	Right-handed alpha
Helix 181	AU1	L	1980	1994	Right-handed alpha
Helix 182	AU2	L	2001	2020	Right-handed alpha
Helix 183	AU3	L	2086	2102	Right-handed alpha
Helix 184	AU4	L	2111	2124	Right-handed alpha
Helix 185	AU5	L	2134	2141	Right-handed alpha
Helix 186	AU6	L	2153	2168	Right-handed alpha
Helix 187	AU7	L	2174	2188	Right-handed alpha
Helix 188	AU8	L	2196	2213	Right-handed alpha
Helix 189	AU9	L	2222	2239	Right-handed alpha
Helix 190	AV1	L	2249	2259	Right-handed alpha
Helix 191	AV2	L	2265	2286	Right-handed alpha
Helix 192	AV3	L	2304	2322	Right-handed alpha
Helix 193	AV4	L	2330	2344	Right-handed alpha
Helix 194	AV5	L	2347	2362	Right-handed alpha
Helix 195	AV6	L	2371	2383	Right-handed alpha
Helix 196	AV7	L	2384	2386	Right-handed 310
Helix 197	AV8	L	2392	2407	Right-handed alpha
Helix 198	AV9	L	2418	2423	Right-handed alpha
Helix 199	AW1	L	2430	2445	Right-handed alpha
Helix 200	AW2	L	2454	2459	Right-handed alpha
Helix 201	AW3	L	2470	2480	Right-handed alpha
Helix 202	AW4	L	2522	2535	Right-handed alpha
Helix 203	AW5	L	2540	2552	Right-handed alpha
Helix 204	AW6	L	2554	2571	Right-handed alpha
Helix 205	AW7	L	2577	2591	Right-handed alpha
Helix 206	AW8	L	2603	2613	Right-handed alpha
Helix 207	AW9	L	2621	2632	Right-handed alpha
Helix 208	AX1	L	2635	2645	Right-handed alpha
Helix 209	AX2	L	2653	2669	Right-handed alpha
Helix 210	AX3	L	2676	2682	Right-handed alpha
Helix 211	AX4	L	2688	2694	Right-handed alpha
Helix 212	AX5	L	2694	2700	Right-handed alpha
Helix 213	AX6	L	2702	2714	Right-handed alpha
Helix 214	AX7	L	2730	2742	Right-handed alpha
Helix 215	AX8	L	2746	2755	Right-handed alpha
Helix 216	AX9	L	2757	2767	Right-handed alpha
Helix 217	AY1	L	2774	2786	Right-handed alpha
Helix 218	AY2	L	2792	2806	Right-handed alpha
Helix 219	AY3	L	2812	2832	Right-handed alpha
Helix 220	AY4	L	2841	2853	Right-handed alpha
Helix 221	AY5	L	2856	2861	Right-handed alpha
Helix 222	AY6	L	2878	2889	Right-handed alpha
Helix 223	AY7	L	2896	2918	Right-handed alpha
Helix 224	AY8	L	2944	2960	Right-handed alpha
Helix 225	AY9	L	3021	3035	Right-handed alpha
Helix 226	AZ1	L	3037	3050	Right-handed alpha
Helix 227	AZ2	L	3057	3073	Right-handed alpha
Helix 228	AZ3	L	3080	3085	Right-handed alpha
Helix 229	AZ4	L	3099	3110	Right-handed alpha
Helix 230	AZ5	L	3118	3124	Right-handed alpha
Helix 231	AZ6	L	3132	3136	Right-handed 310
Helix 232	AZ7	L	3138	3146	Right-handed alpha
Helix 233	AZ8	L	3150	3157	Right-handed alpha
Helix 234	AZ9	L	3158	3165	Right-handed alpha
Helix 235	BA1	L	3169	3174	Right-handed alpha
Helix 236	BA2	L	3285	3296	Right-handed alpha
Helix 237	BA3	L	3297	3314	Right-handed alpha
Helix 238	BA4	L	3412	3416	Right-handed alpha
Helix 239	BA5	L	3416	3421	Right-handed alpha
Helix 240	BA6	L	3490	3509	Right-handed alpha
Helix 241	BA7	L	3544	3556	Right-handed alpha
Helix 242	BA8	L	3604	3612	Right-handed alpha
Helix 243	BA9	L	3615	3639	Right-handed alpha
Helix 244	BB1	L	3706	3714	Right-handed alpha
Helix 245	BB2	L	3721	3734	Right-handed alpha
Helix 246	BB3	L	3751	3760	Right-handed alpha
Helix 247	BB4	L	3768	3785	Right-handed alpha
Helix 248	BB5	L	3786	3788	Right-handed 310
Helix 249	BB6	L	3800	3809	Right-handed alpha
Helix 250	BB7	L	3810	3816	Right-handed alpha
Helix 251	BB8	B	399	414	Right-handed alpha
Helix 252	BB9	B	463	471	Right-handed alpha
Helix 253	BC1	B	510	522	Right-handed alpha
Helix 254	BC2	B	530	538	Right-handed alpha
Helix 255	BC3	B	546	557	Right-handed alpha

There are 15 sheets in PDB entry 6TB4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	102	106	first strand
Strand 2	M	111	115	anti-parallel
Strand 3	M	120	126	anti-parallel
Strand 4	M	66	75	anti-parallel
Strand 5	M	156	165	anti-parallel
Strand 6	M	211	217	anti-parallel
Strand 7	M	202	206	anti-parallel
Strand 8	M	193	197	anti-parallel
Strand 9	M	183	184	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	92	94	first strand
Strand 2	F	83	87	anti-parallel
Strand 3	F	140	145	parallel
Strand 4	F	185	190	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	703	706	first strand
Strand 2	G	716	719	anti-parallel
Strand 3	G	384	386	parallel
Strand 4	H	136	138	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	393	398	first strand
Strand 2	G	404	409	anti-parallel
Strand 3	G	414	418	anti-parallel
Strand 4	G	446	449	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	456	461	first strand
Strand 2	G	467	472	anti-parallel
Strand 3	G	477	481	anti-parallel
Strand 4	G	487	491	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	498	503	first strand
Strand 2	G	509	514	anti-parallel
Strand 3	G	519	523	anti-parallel
Strand 4	G	531	533	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	540	545	first strand
Strand 2	G	551	556	anti-parallel
Strand 3	G	560	565	anti-parallel
Strand 4	G	571	576	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	584	587	first strand
Strand 2	G	593	597	anti-parallel
Strand 3	G	604	607	anti-parallel
Strand 4	G	613	615	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	625	630	first strand
Strand 2	G	636	641	anti-parallel
Strand 3	G	645	650	anti-parallel
Strand 4	G	694	697	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	954	956	first strand
Strand 2	L	967	969	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	3410	3411	first strand
Strand 2	L	3455	3456	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	3451	3452	first strand
Strand 2	L	3471	3472	anti-parallel
Strand 3	L	3478	3479	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	3459	3460	first strand
Strand 2	L	3465	3466	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	3481	3484	first strand
Strand 2	L	3534	3537	anti-parallel
Strand 3	L	3526	3528	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	3650	3652	first strand
Strand 2	L	3659	3661	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6TB4

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TB4