Analysis of interatomic Contacts of Structural Units in PDB entry:
6TBJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TBJ entry

There are 3 chains in PDB entry 6TBJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 37GLN 575
B
ALA 37GLN 575
C
ALA 37TYR 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are152 helices in PDB entry 6TBJ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
71 77Right-handed 310
Helix 2
AA2
A
78 86Right-handed alpha
Helix 3
AA3
A
96 100Right-handed alpha
Helix 4
AA4
A
108 121Right-handed alpha
Helix 5
AA5
A
142 147Right-handed alpha
Helix 6
AA6
A
170 192Right-handed alpha
Helix 7
AA7
A
216 224Right-handed alpha
Helix 8
AA8
A
228 235Right-handed alpha
Helix 9
AA9
A
241 247Right-handed alpha
Helix 10
AB1
A
249 274Right-handed alpha
Helix 11
AB2
A
302 304Right-handed 310
Helix 12
AB3
A
305 313Right-handed alpha
Helix 13
AB4
A
327 339Right-handed alpha
Helix 14
AB5
A
353 358Right-handed 310
Helix 15
AB6
A
359 366Right-handed alpha
Helix 16
AB7
A
392 407Right-handed alpha
Helix 17
AB8
A
409 420Right-handed alpha
Helix 18
AB9
A
449 459Right-handed alpha
Helix 19
AC1
A
549 554Right-handed alpha
Helix 20
AC2
B
71 77Right-handed 310
Helix 21
AC3
B
78 86Right-handed alpha
Helix 22
AC4
B
96 100Right-handed alpha
Helix 23
AC5
B
108 121Right-handed alpha
Helix 24
AC6
B
142 147Right-handed alpha
Helix 25
AC7
B
170 192Right-handed alpha
Helix 26
AC8
B
216 224Right-handed alpha
Helix 27
AC9
B
228 236Right-handed alpha
Helix 28
AD1
B
241 247Right-handed alpha
Helix 29
AD2
B
249 274Right-handed alpha
Helix 30
AD3
B
302 304Right-handed 310
Helix 31
AD4
B
305 313Right-handed alpha
Helix 32
AD5
B
327 339Right-handed alpha
Helix 33
AD6
B
353 358Right-handed 310
Helix 34
AD7
B
359 366Right-handed alpha
Helix 35
AD8
B
392 407Right-handed alpha
Helix 36
AD9
B
409 420Right-handed alpha
Helix 37
AE1
B
449 459Right-handed alpha
Helix 38
AE2
B
549 554Right-handed alpha
Helix 39
AE3
C
71 77Right-handed 310
Helix 40
AE4
C
78 86Right-handed alpha
Helix 41
AE5
C
96 100Right-handed alpha
Helix 42
AE6
C
108 122Right-handed alpha
Helix 43
AE7
C
142 147Right-handed alpha
Helix 44
AE8
C
170 192Right-handed alpha
Helix 45
AE9
C
216 224Right-handed alpha
Helix 46
AF1
C
228 236Right-handed alpha
Helix 47
AF2
C
241 247Right-handed alpha
Helix 48
AF3
C
249 272Right-handed alpha
Helix 49
AF4
C
302 304Right-handed 310
Helix 50
AF5
C
305 313Right-handed alpha
Helix 51
AF6
C
327 339Right-handed alpha
Helix 52
AF7
C
353 358Right-handed 310
Helix 53
AF8
C
359 366Right-handed alpha
Helix 54
AF9
C
392 407Right-handed alpha
Helix 55
AG1
C
409 420Right-handed alpha
Helix 56
AG2
C
448 459Right-handed alpha
Helix 57
AG3
C
549 554Right-handed alpha
Helix 58
AG4
D
71 77Right-handed 310
Helix 59
AG5
D
78 86Right-handed alpha
Helix 60
AG6
D
96 100Right-handed alpha
Helix 61
AG7
D
108 122Right-handed alpha
Helix 62
AG8
D
142 147Right-handed alpha
Helix 63
AG9
D
170 192Right-handed alpha
Helix 64
AH1
D
216 224Right-handed alpha
Helix 65
AH2
D
228 236Right-handed alpha
Helix 66
AH3
D
241 247Right-handed alpha
Helix 67
AH4
D
249 274Right-handed alpha
Helix 68
AH5
D
305 313Right-handed alpha
Helix 69
AH6
D
327 339Right-handed alpha
Helix 70
AH7
D
353 358Right-handed 310
Helix 71
AH8
D
359 366Right-handed alpha
Helix 72
AH9
D
392 407Right-handed alpha
Helix 73
AI1
D
409 420Right-handed alpha
Helix 74
AI2
D
433 439Right-handed alpha
Helix 75
AI3
D
449 459Right-handed alpha
Helix 76
AI4
D
549 554Right-handed alpha
Helix 77
AI5
E
71 77Right-handed 310
Helix 78
AI6
E
78 86Right-handed alpha
Helix 79
AI7
E
96 100Right-handed alpha
Helix 80
AI8
E
108 121Right-handed alpha
Helix 81
AI9
E
142 147Right-handed alpha
Helix 82
AJ1
E
170 192Right-handed alpha
Helix 83
AJ2
E
216 224Right-handed alpha
Helix 84
AJ3
E
228 236Right-handed alpha
Helix 85
AJ4
E
241 247Right-handed alpha
Helix 86
AJ5
E
249 274Right-handed alpha
Helix 87
AJ6
E
302 304Right-handed 310
Helix 88
AJ7
E
305 313Right-handed alpha
Helix 89
AJ8
E
327 339Right-handed alpha
Helix 90
AJ9
E
353 358Right-handed 310
Helix 91
AK1
E
359 366Right-handed alpha
Helix 92
AK2
E
392 407Right-handed alpha
Helix 93
AK3
E
409 420Right-handed alpha
Helix 94
AK4
E
446 459Right-handed alpha
Helix 95
AK5
E
549 554Right-handed alpha
Helix 96
AK6
F
71 77Right-handed 310
Helix 97
AK7
F
78 86Right-handed alpha
Helix 98
AK8
F
96 100Right-handed alpha
Helix 99
AK9
F
108 121Right-handed alpha
Helix 100
AL1
F
142 147Right-handed alpha
Helix 101
AL2
F
170 192Right-handed alpha
Helix 102
AL3
F
216 224Right-handed alpha
Helix 103
AL4
F
228 235Right-handed alpha
Helix 104
AL5
F
241 247Right-handed alpha
Helix 105
AL6
F
249 272Right-handed alpha
Helix 106
AL7
F
302 304Right-handed 310
Helix 107
AL8
F
305 313Right-handed alpha
Helix 108
AL9
F
327 339Right-handed alpha
Helix 109
AM1
F
353 358Right-handed 310
Helix 110
AM2
F
359 366Right-handed alpha
Helix 111
AM3
F
392 407Right-handed alpha
Helix 112
AM4
F
409 420Right-handed alpha
Helix 113
AM5
F
447 459Right-handed alpha
Helix 114
AM6
F
549 554Right-handed alpha
Helix 115
AM7
G
71 77Right-handed 310
Helix 116
AM8
G
78 86Right-handed alpha
Helix 117
AM9
G
96 100Right-handed alpha
Helix 118
AN1
G
108 121Right-handed alpha
Helix 119
AN2
G
142 147Right-handed alpha
Helix 120
AN3
G
170 192Right-handed alpha
Helix 121
AN4
G
216 224Right-handed alpha
Helix 122
AN5
G
228 236Right-handed alpha
Helix 123
AN6
G
241 247Right-handed alpha
Helix 124
AN7
G
249 274Right-handed alpha
Helix 125
AN8
G
305 313Right-handed alpha
Helix 126
AN9
G
327 339Right-handed alpha
Helix 127
AO1
G
353 358Right-handed 310
Helix 128
AO2
G
359 366Right-handed alpha
Helix 129
AO3
G
392 407Right-handed alpha
Helix 130
AO4
G
409 420Right-handed alpha
Helix 131
AO5
G
433 439Right-handed alpha
Helix 132
AO6
G
449 459Right-handed alpha
Helix 133
AO7
G
549 554Right-handed alpha
Helix 134
AO8
H
71 77Right-handed 310
Helix 135
AO9
H
78 86Right-handed alpha
Helix 136
AP1
H
96 100Right-handed alpha
Helix 137
AP2
H
108 121Right-handed alpha
Helix 138
AP3
H
142 147Right-handed alpha
Helix 139
AP4
H
170 192Right-handed alpha
Helix 140
AP5
H
216 224Right-handed alpha
Helix 141
AP6
H
228 236Right-handed alpha
Helix 142
AP7
H
241 247Right-handed alpha
Helix 143
AP8
H
249 274Right-handed alpha
Helix 144
AP9
H
302 304Right-handed 310
Helix 145
AQ1
H
305 313Right-handed alpha
Helix 146
AQ2
H
327 339Right-handed alpha
Helix 147
AQ3
H
353 358Right-handed 310
Helix 148
AQ4
H
359 366Right-handed alpha
Helix 149
AQ5
H
392 407Right-handed alpha
Helix 150
AQ6
H
409 420Right-handed alpha
Helix 151
AQ7
H
451 459Right-handed alpha
Helix 152
AQ8
H
549 554Right-handed alpha
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There are 40 sheets in PDB entry 6TBJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
41 45first strand
Strand 2
A
48 53anti-parallel
Strand 3
A
56 58anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
60 64first strand
Strand 2
A
89 95parallel
Strand 3
A
124 134parallel
Strand 4
A
197 204parallel
Strand 5
A
278 283parallel
Strand 6
A
318 323parallel
Strand 7
A
346 350parallel
Strand 8
A
370 373parallel
Strand 9
A
60 64parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
154 156first strand
Strand 2
A
162 166anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
422 426first strand
Strand 2
A
493 500anti-parallel
Strand 3
A
503 509anti-parallel
Strand 4
A
565 572anti-parallel
Strand 5
A
525 537anti-parallel
Strand 6
A
540 547anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
460 464first strand
Strand 2
A
468 473anti-parallel
Strand 3
A
511 517anti-parallel
Strand 4
A
556 558anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
41 45first strand
Strand 2
B
48 53anti-parallel
Strand 3
B
56 58anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
60 64first strand
Strand 2
B
89 95parallel
Strand 3
B
124 134parallel
Strand 4
B
197 204parallel
Strand 5
B
278 283parallel
Strand 6
B
318 323parallel
Strand 7
B
346 350parallel
Strand 8
B
370 373parallel
Strand 9
B
60 64parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
154 156first strand
Strand 2
B
162 166anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
422 426first strand
Strand 2
B
493 500anti-parallel
Strand 3
B
503 509anti-parallel
Strand 4
B
565 572anti-parallel
Strand 5
B
525 537anti-parallel
Strand 6
B
540 547anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
460 464first strand
Strand 2
B
468 473anti-parallel
Strand 3
B
511 517anti-parallel
Strand 4
B
556 558anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
41 45first strand
Strand 2
C
48 53anti-parallel
Strand 3
C
56 58anti-parallel
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There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
60 64first strand
Strand 2
C
89 95parallel
Strand 3
C
124 134parallel
Strand 4
C
197 204parallel
Strand 5
C
278 283parallel
Strand 6
C
318 323parallel
Strand 7
C
346 350parallel
Strand 8
C
370 373parallel
Strand 9
C
60 64parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
154 156first strand
Strand 2
C
162 166anti-parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
422 426first strand
Strand 2
C
493 500anti-parallel
Strand 3
C
503 509anti-parallel
Strand 4
C
565 573anti-parallel
Strand 5
C
524 537anti-parallel
Strand 6
C
540 547anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
460 464first strand
Strand 2
C
468 473anti-parallel
Strand 3
C
511 517anti-parallel
Strand 4
C
556 558anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
41 45first strand
Strand 2
D
48 53anti-parallel
Strand 3
D
56 58anti-parallel
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There are 9 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
60 64first strand
Strand 2
D
89 95parallel
Strand 3
D
124 134parallel
Strand 4
D
197 204parallel
Strand 5
D
278 283parallel
Strand 6
D
318 323parallel
Strand 7
D
346 350parallel
Strand 8
D
370 373parallel
Strand 9
D
60 64parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
154 156first strand
Strand 2
D
162 166anti-parallel
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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
422 426first strand
Strand 2
D
493 500anti-parallel
Strand 3
D
503 509anti-parallel
Strand 4
D
564 572anti-parallel
Strand 5
D
525 537anti-parallel
Strand 6
D
540 547anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
460 464first strand
Strand 2
D
468 473anti-parallel
Strand 3
D
511 517anti-parallel
Strand 4
D
556 558anti-parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
41 45first strand
Strand 2
E
48 53anti-parallel
Strand 3
E
56 58anti-parallel
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There are 9 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
60 64first strand
Strand 2
E
89 95parallel
Strand 3
E
124 134parallel
Strand 4
E
197 204parallel
Strand 5
E
278 283parallel
Strand 6
E
318 323parallel
Strand 7
E
346 350parallel
Strand 8
E
370 373parallel
Strand 9
E
60 64parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
154 156first strand
Strand 2
E
162 166anti-parallel
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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
422 426first strand
Strand 2
E
493 500anti-parallel
Strand 3
E
503 509anti-parallel
Strand 4
E
565 572anti-parallel
Strand 5
E
525 537anti-parallel
Strand 6
E
540 547anti-parallel
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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
460 464first strand
Strand 2
E
468 473anti-parallel
Strand 3
E
511 517anti-parallel
Strand 4
E
556 558anti-parallel
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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
41 45first strand
Strand 2
F
48 53anti-parallel
Strand 3
F
56 58anti-parallel
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There are 9 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
60 64first strand
Strand 2
F
89 95parallel
Strand 3
F
124 134parallel
Strand 4
F
197 204parallel
Strand 5
F
278 283parallel
Strand 6
F
318 323parallel
Strand 7
F
346 350parallel
Strand 8
F
370 373parallel
Strand 9
F
60 64parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
154 156first strand
Strand 2
F
162 166anti-parallel
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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
422 426first strand
Strand 2
F
493 500anti-parallel
Strand 3
F
503 509anti-parallel
Strand 4
F
565 572anti-parallel
Strand 5
F
525 537anti-parallel
Strand 6
F
540 547anti-parallel
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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
460 464first strand
Strand 2
F
468 473anti-parallel
Strand 3
F
511 517anti-parallel
Strand 4
F
556 558anti-parallel
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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
41 45first strand
Strand 2
G
48 53anti-parallel
Strand 3
G
56 58anti-parallel
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There are 9 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
60 64first strand
Strand 2
G
89 95parallel
Strand 3
G
124 134parallel
Strand 4
G
197 204parallel
Strand 5
G
278 283parallel
Strand 6
G
318 323parallel
Strand 7
G
346 350parallel
Strand 8
G
370 373parallel
Strand 9
G
60 64parallel
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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
154 156first strand
Strand 2
G
162 166anti-parallel
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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
422 426first strand
Strand 2
G
493 500anti-parallel
Strand 3
G
503 509anti-parallel
Strand 4
G
564 572anti-parallel
Strand 5
G
525 537anti-parallel
Strand 6
G
540 547anti-parallel
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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
460 464first strand
Strand 2
G
468 473anti-parallel
Strand 3
G
511 517anti-parallel
Strand 4
G
556 558anti-parallel
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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
41 45first strand
Strand 2
H
48 53anti-parallel
Strand 3
H
56 58anti-parallel
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There are 9 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
60 64first strand
Strand 2
H
89 95parallel
Strand 3
H
124 134parallel
Strand 4
H
197 204parallel
Strand 5
H
278 283parallel
Strand 6
H
318 323parallel
Strand 7
H
346 350parallel
Strand 8
H
370 373parallel
Strand 9
H
60 64parallel
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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
154 156first strand
Strand 2
H
162 166anti-parallel
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There are 6 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
422 426first strand
Strand 2
H
493 500anti-parallel
Strand 3
H
503 509anti-parallel
Strand 4
H
565 572anti-parallel
Strand 5
H
525 537anti-parallel
Strand 6
H
540 547anti-parallel
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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
460 464first strand
Strand 2
H
468 473anti-parallel
Strand 3
H
511 517anti-parallel
Strand 4
H
556 558anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il