Analysis of interatomic Contacts of Structural Units in PDB entry:
6TC0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TC0 entry

There are 3 chains in PDB entry 6TC0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 0	GLU 335
B	PRO 2	LYS 155
C	PRO 13	GLU 833

There are128 helices in PDB entry 6TC0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	11	16	Right-handed alpha
Helix 2	AA2	B	22	28	Right-handed alpha
Helix 3	AA3	B	35	44	Right-handed alpha
Helix 4	AA4	B	62	64	Right-handed 310
Helix 5	AA5	B	88	104	Right-handed alpha
Helix 6	AA6	B	121	131	Right-handed alpha
Helix 7	AA7	B	131	140	Right-handed alpha
Helix 8	AA8	B	141	153	Right-handed alpha
Helix 9	AA9	C	14	26	Right-handed alpha
Helix 10	AB1	C	29	43	Right-handed alpha
Helix 11	AB2	C	47	59	Right-handed alpha
Helix 12	AB3	C	62	81	Right-handed alpha
Helix 13	AB4	C	85	103	Right-handed alpha
Helix 14	AB5	C	106	119	Right-handed alpha
Helix 15	AB6	C	124	139	Right-handed alpha
Helix 16	AB7	C	145	163	Right-handed alpha
Helix 17	AB8	C	163	170	Right-handed alpha
Helix 18	AB9	C	171	182	Right-handed alpha
Helix 19	AC1	C	187	204	Right-handed alpha
Helix 20	AC2	C	211	223	Right-handed alpha
Helix 21	AC3	C	238	251	Right-handed alpha
Helix 22	AC4	C	253	255	Right-handed 310
Helix 23	AC5	C	256	270	Right-handed alpha
Helix 24	AC6	C	272	287	Right-handed alpha
Helix 25	AC7	C	291	297	Right-handed alpha
Helix 26	AC8	C	298	313	Right-handed alpha
Helix 27	AC9	C	315	340	Right-handed alpha
Helix 28	AD1	C	346	363	Right-handed alpha
Helix 29	AD2	C	365	381	Right-handed alpha
Helix 30	AD3	C	383	405	Right-handed alpha
Helix 31	AD4	C	407	428	Right-handed alpha
Helix 32	AD5	C	434	455	Right-handed alpha
Helix 33	AD6	C	457	474	Right-handed alpha
Helix 34	AD7	C	479	496	Right-handed alpha
Helix 35	AD8	C	500	518	Right-handed alpha
Helix 36	AD9	C	518	526	Right-handed alpha
Helix 37	AE1	C	526	539	Right-handed alpha
Helix 38	AE2	C	549	564	Right-handed alpha
Helix 39	AE3	C	566	585	Right-handed alpha
Helix 40	AE4	C	592	611	Right-handed alpha
Helix 41	AE5	C	613	623	Right-handed alpha
Helix 42	AE6	C	623	637	Right-handed alpha
Helix 43	AE7	C	653	667	Right-handed alpha
Helix 44	AE8	C	670	688	Right-handed alpha
Helix 45	AE9	C	694	698	Right-handed 310
Helix 46	AF1	C	709	715	Right-handed alpha
Helix 47	AF2	C	715	724	Right-handed alpha
Helix 48	AF3	C	734	749	Right-handed alpha
Helix 49	AF4	C	753	769	Right-handed alpha
Helix 50	AF5	C	772	792	Right-handed alpha
Helix 51	AF6	C	795	813	Right-handed alpha
Helix 52	AF7	C	817	828	Right-handed alpha
Helix 53	AF8	C	829	831	Right-handed 310
Helix 54	AF9	C	834	846	Right-handed alpha
Helix 55	AG1	C	864	883	Right-handed alpha
Helix 56	AG2	C	889	901	Right-handed alpha
Helix 57	AG3	C	907	922	Right-handed alpha
Helix 58	AG4	C	927	945	Right-handed alpha
Helix 59	AG5	C	945	950	Right-handed alpha
Helix 60	AG6	C	952	964	Right-handed alpha
Helix 61	AG7	C	968	982	Right-handed alpha
Helix 62	AG8	C	983	985	Right-handed 310
Helix 63	AG9	C	986	1002	Right-handed alpha
Helix 64	AH1	C	1003	1007	Right-handed 310
Helix 65	AH2	C	1009	1025	Right-handed alpha
Helix 66	AH3	E	12	16	Right-handed 310
Helix 67	AH4	E	22	28	Right-handed alpha
Helix 68	AH5	E	35	44	Right-handed alpha
Helix 69	AH6	E	62	64	Right-handed 310
Helix 70	AH7	E	88	104	Right-handed alpha
Helix 71	AH8	E	121	131	Right-handed alpha
Helix 72	AH9	E	131	140	Right-handed alpha
Helix 73	AI1	E	141	153	Right-handed alpha
Helix 74	AI2	F	16	27	Right-handed alpha
Helix 75	AI3	F	29	43	Right-handed alpha
Helix 76	AI4	F	47	59	Right-handed alpha
Helix 77	AI5	F	62	81	Right-handed alpha
Helix 78	AI6	F	85	102	Right-handed alpha
Helix 79	AI7	F	106	118	Right-handed alpha
Helix 80	AI8	F	124	139	Right-handed alpha
Helix 81	AI9	F	145	163	Right-handed alpha
Helix 82	AJ1	F	163	170	Right-handed alpha
Helix 83	AJ2	F	171	182	Right-handed alpha
Helix 84	AJ3	F	187	204	Right-handed alpha
Helix 85	AJ4	F	211	221	Right-handed alpha
Helix 86	AJ5	F	238	251	Right-handed alpha
Helix 87	AJ6	F	253	255	Right-handed 310
Helix 88	AJ7	F	256	270	Right-handed alpha
Helix 89	AJ8	F	272	287	Right-handed alpha
Helix 90	AJ9	F	291	297	Right-handed alpha
Helix 91	AK1	F	298	313	Right-handed alpha
Helix 92	AK2	F	315	340	Right-handed alpha
Helix 93	AK3	F	346	363	Right-handed alpha
Helix 94	AK4	F	365	381	Right-handed alpha
Helix 95	AK5	F	383	405	Right-handed alpha
Helix 96	AK6	F	407	428	Right-handed alpha
Helix 97	AK7	F	434	455	Right-handed alpha
Helix 98	AK8	F	457	474	Right-handed alpha
Helix 99	AK9	F	479	496	Right-handed alpha
Helix 100	AL1	F	500	518	Right-handed alpha
Helix 101	AL2	F	518	526	Right-handed alpha
Helix 102	AL3	F	526	536	Right-handed alpha
Helix 103	AL4	F	549	564	Right-handed alpha
Helix 104	AL5	F	566	585	Right-handed alpha
Helix 105	AL6	F	592	611	Right-handed alpha
Helix 106	AL7	F	613	637	Right-handed alpha
Helix 107	AL8	F	651	667	Right-handed alpha
Helix 108	AL9	F	670	688	Right-handed alpha
Helix 109	AM1	F	709	715	Right-handed alpha
Helix 110	AM2	F	715	725	Right-handed alpha
Helix 111	AM3	F	734	749	Right-handed alpha
Helix 112	AM4	F	753	769	Right-handed alpha
Helix 113	AM5	F	772	792	Right-handed alpha
Helix 114	AM6	F	796	813	Right-handed alpha
Helix 115	AM7	F	817	828	Right-handed alpha
Helix 116	AM8	F	829	831	Right-handed 310
Helix 117	AM9	F	834	847	Right-handed alpha
Helix 118	AN1	F	864	883	Right-handed alpha
Helix 119	AN2	F	889	901	Right-handed alpha
Helix 120	AN3	F	907	922	Right-handed alpha
Helix 121	AN4	F	927	945	Right-handed alpha
Helix 122	AN5	F	945	950	Right-handed alpha
Helix 123	AN6	F	952	964	Right-handed alpha
Helix 124	AN7	F	968	982	Right-handed alpha
Helix 125	AN8	F	983	985	Right-handed 310
Helix 126	AN9	F	986	1002	Right-handed alpha
Helix 127	AO1	F	1003	1007	Right-handed 310
Helix 128	AO2	F	1009	1023	Right-handed alpha

There are 16 sheets in PDB entry 6TC0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	10	first strand
Strand 2	A	328	334	anti-parallel
Strand 3	A	318	323	anti-parallel
Strand 4	A	306	311	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	22	first strand
Strand 2	A	28	33	anti-parallel
Strand 3	A	38	44	anti-parallel
Strand 4	A	47	54	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	67	first strand
Strand 2	A	73	78	anti-parallel
Strand 3	A	83	87	anti-parallel
Strand 4	A	94	99	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	106	111	first strand
Strand 2	A	117	122	anti-parallel
Strand 3	A	127	131	anti-parallel
Strand 4	A	139	144	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	156	first strand
Strand 2	A	163	167	anti-parallel
Strand 3	A	172	177	anti-parallel
Strand 4	A	184	190	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	197	202	first strand
Strand 2	A	208	213	anti-parallel
Strand 3	A	218	224	anti-parallel
Strand 4	A	240	247	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	255	260	first strand
Strand 2	A	267	271	anti-parallel
Strand 3	A	276	281	anti-parallel
Strand 4	A	292	298	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	69	first strand
Strand 2	B	74	79	anti-parallel
Strand 3	B	109	114	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	10	first strand
Strand 2	D	328	334	anti-parallel
Strand 3	D	318	323	anti-parallel
Strand 4	D	306	311	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	17	22	first strand
Strand 2	D	28	33	anti-parallel
Strand 3	D	38	44	anti-parallel
Strand 4	D	47	54	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	62	67	first strand
Strand 2	D	73	78	anti-parallel
Strand 3	D	83	87	anti-parallel
Strand 4	D	94	99	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	106	111	first strand
Strand 2	D	117	122	anti-parallel
Strand 3	D	127	131	anti-parallel
Strand 4	D	139	144	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	151	156	first strand
Strand 2	D	163	167	anti-parallel
Strand 3	D	172	177	anti-parallel
Strand 4	D	184	190	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	197	202	first strand
Strand 2	D	208	213	anti-parallel
Strand 3	D	218	224	anti-parallel
Strand 4	D	240	247	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	255	260	first strand
Strand 2	D	267	271	anti-parallel
Strand 3	D	276	281	anti-parallel
Strand 4	D	292	298	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	66	69	first strand
Strand 2	E	74	79	anti-parallel
Strand 3	E	109	114	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6TC0

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TC0