Analysis of interatomic Contacts of Structural Units in PDB entry:
6TCP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TCP entry

There are 7 chains in PDB entry 6TCP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
L
ASP 1GLU 217
H
GLU 1LYS 222
A
ASP 1GLU 217
B
GLU 1LYS 222
C
ASP 1GLY 216
D
GLU 1LYS 222
E
ASP 1LYS 49
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6TCP. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
L
83 87Right-handed 310
Helix 2
AA2
L
125 130Right-handed alpha
Helix 3
AA3
L
187 192Right-handed alpha
Helix 4
AA4
H
28 32Right-handed 310
Helix 5
AA5
H
87 91Right-handed 310
Helix 6
AA6
H
195 197Right-handed 310
Helix 7
AA7
H
209 212Right-handed 310
Helix 8
AA8
A
83 87Right-handed 310
Helix 9
AA9
A
125 130Right-handed alpha
Helix 10
AB1
A
187 192Right-handed alpha
Helix 11
AB2
B
28 32Right-handed 310
Helix 12
AB3
B
74 76Right-handed 310
Helix 13
AB4
B
87 91Right-handed 310
Helix 14
AB5
B
164 166Right-handed 310
Helix 15
AB6
B
195 197Right-handed 310
Helix 16
AB7
B
209 212Right-handed 310
Helix 17
AB8
C
83 87Right-handed 310
Helix 18
AB9
C
125 130Right-handed alpha
Helix 19
AC1
C
187 192Right-handed alpha
Helix 20
AC2
D
87 91Right-handed 310
Helix 21
AC3
D
164 166Right-handed 310
Helix 22
AC4
D
209 212Right-handed 310
Helix 23
AC5
E
83 87Right-handed 310
Helix 24
AC6
E
125 131Right-handed alpha
Helix 25
AC7
E
187 192Right-handed alpha
Helix 26
AC8
F
87 91Right-handed 310
Helix 27
AC9
F
164 166Right-handed 310
Helix 28
AD1
F
195 200Right-handed alpha
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There are 40 sheets in PDB entry 6TCP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
4 7first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
74 79anti-parallel
Strand 4
L
66 71anti-parallel
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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
57 58first strand
Strand 2
L
49 53anti-parallel
Strand 3
L
37 42anti-parallel
Strand 4
L
88 94anti-parallel
Strand 5
L
106 111anti-parallel
Strand 6
L
10 14parallel
Strand 7
C
10 14anti-parallel
Strand 8
C
106 111parallel
Strand 9
C
88 94anti-parallel
Strand 10
C
37 42anti-parallel
Strand 11
C
49 53anti-parallel
Strand 12
C
57 58anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
30 31first strand
Strand 2
L
34 35anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
118 122first strand
Strand 2
L
133 143anti-parallel
Strand 3
L
177 186anti-parallel
Strand 4
L
163 167anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
157 158first strand
Strand 2
L
149 154anti-parallel
Strand 3
L
195 201anti-parallel
Strand 4
L
209 214anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
3 7first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 73anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
10 12first strand
Strand 2
H
115 119parallel
Strand 3
H
92 98anti-parallel
Strand 4
H
34 40anti-parallel
Strand 5
H
46 53anti-parallel
Strand 6
H
58 60anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
128 132first strand
Strand 2
H
143 153anti-parallel
Strand 3
H
184 193anti-parallel
Strand 4
H
171 173anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
128 132first strand
Strand 2
H
143 153anti-parallel
Strand 3
H
184 193anti-parallel
Strand 4
H
177 178anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
159 162first strand
Strand 2
H
203 208anti-parallel
Strand 3
H
213 218anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
4 7first strand
Strand 2
A
19 25anti-parallel
Strand 3
A
74 79anti-parallel
Strand 4
A
66 71anti-parallel
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There are 12 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
57 58first strand
Strand 2
A
49 53anti-parallel
Strand 3
A
37 42anti-parallel
Strand 4
A
88 94anti-parallel
Strand 5
A
106 111anti-parallel
Strand 6
A
10 14parallel
Strand 7
E
10 14anti-parallel
Strand 8
E
106 111parallel
Strand 9
E
88 94anti-parallel
Strand 10
E
37 42anti-parallel
Strand 11
E
49 53anti-parallel
Strand 12
E
57 58anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
30 31first strand
Strand 2
A
34 35anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
118 122first strand
Strand 2
A
133 143anti-parallel
Strand 3
A
177 186anti-parallel
Strand 4
A
163 167anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
157 158first strand
Strand 2
A
148 154anti-parallel
Strand 3
A
195 202anti-parallel
Strand 4
A
209 214anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
3 7first strand
Strand 2
B
18 25anti-parallel
Strand 3
B
78 83anti-parallel
Strand 4
B
68 73anti-parallel
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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
10 12first strand
Strand 2
B
115 119parallel
Strand 3
B
92 98anti-parallel
Strand 4
B
34 40anti-parallel
Strand 5
B
46 53anti-parallel
Strand 6
B
58 60anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
10 12first strand
Strand 2
B
115 119parallel
Strand 3
B
92 98anti-parallel
Strand 4
B
110 111anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
128 132first strand
Strand 2
B
143 153anti-parallel
Strand 3
B
184 193anti-parallel
Strand 4
B
171 173anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
128 132first strand
Strand 2
B
143 153anti-parallel
Strand 3
B
184 193anti-parallel
Strand 4
B
177 178anti-parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
159 162first strand
Strand 2
B
202 208anti-parallel
Strand 3
B
213 219anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
4 7first strand
Strand 2
C
19 25anti-parallel
Strand 3
C
74 79anti-parallel
Strand 4
C
66 71anti-parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
30 31first strand
Strand 2
C
34 35anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
118 122first strand
Strand 2
C
133 143anti-parallel
Strand 3
C
177 186anti-parallel
Strand 4
C
163 167anti-parallel
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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
149 154first strand
Strand 2
C
195 201anti-parallel
Strand 3
C
209 214anti-parallel
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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
3 7first strand
Strand 2
D
18 25anti-parallel
Strand 3
D
78 83anti-parallel
Strand 4
D
68 73anti-parallel
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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
10 12first strand
Strand 2
D
115 119parallel
Strand 3
D
92 98anti-parallel
Strand 4
D
35 40anti-parallel
Strand 5
D
47 52anti-parallel
Strand 6
D
58 60anti-parallel
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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
10 12first strand
Strand 2
D
115 119parallel
Strand 3
D
92 98anti-parallel
Strand 4
D
110 111anti-parallel
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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
128 132first strand
Strand 2
D
144 153anti-parallel
Strand 3
D
184 192anti-parallel
Strand 4
D
171 173anti-parallel
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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
128 132first strand
Strand 2
D
144 153anti-parallel
Strand 3
D
184 192anti-parallel
Strand 4
D
177 178anti-parallel
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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
159 162first strand
Strand 2
D
203 208anti-parallel
Strand 3
D
213 218anti-parallel
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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
4 7first strand
Strand 2
E
19 25anti-parallel
Strand 3
E
74 79anti-parallel
Strand 4
E
66 71anti-parallel
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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
118 122first strand
Strand 2
E
133 143anti-parallel
Strand 3
E
177 186anti-parallel
Strand 4
E
163 167anti-parallel
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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
157 158first strand
Strand 2
E
149 154anti-parallel
Strand 3
E
195 201anti-parallel
Strand 4
E
209 214anti-parallel
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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
3 7first strand
Strand 2
F
18 25anti-parallel
Strand 3
F
78 83anti-parallel
Strand 4
F
68 73anti-parallel
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There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
10 12first strand
Strand 2
F
115 119parallel
Strand 3
F
92 98anti-parallel
Strand 4
F
35 40anti-parallel
Strand 5
F
47 52anti-parallel
Strand 6
F
58 60anti-parallel
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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
10 12first strand
Strand 2
F
115 119parallel
Strand 3
F
92 98anti-parallel
Strand 4
F
110 111anti-parallel
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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
128 132first strand
Strand 2
F
143 153anti-parallel
Strand 3
F
184 193anti-parallel
Strand 4
F
171 173anti-parallel
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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
128 132first strand
Strand 2
F
143 153anti-parallel
Strand 3
F
184 193anti-parallel
Strand 4
F
177 178anti-parallel
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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
159 162first strand
Strand 2
F
202 208anti-parallel
Strand 3
F
213 219anti-parallel
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