Analysis of interatomic Contacts of Structural Units in PDB entry:
6TEB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TEB entry

There are 4 chains in PDB entry 6TEB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3ALA 136
B
 ALA 3ALA 136
D
 ALA 2ARG 209
C
 ALA 2ARG 209
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 6TEB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
73 85Right-handed alpha
Helix 2
AA2
B
73 85Right-handed alpha
Helix 3
AA3
D
55 68Right-handed alpha
Helix 4
AA4
C
55 68Right-handed alpha
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There are 7 sheets in PDB entry 6TEB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
11 13anti-parallel
Strand 3
A
90 93anti-parallel
Strand 4
A
103 115anti-parallel
Strand 5
A
120 128anti-parallel
Strand 6
A
60 69anti-parallel
Strand 7
A
29 36anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
11 13anti-parallel
Strand 3
A
90 93anti-parallel
Strand 4
A
103 115anti-parallel
Strand 5
B
29 36anti-parallel
Strand 6
B
60 69anti-parallel
Strand 7
B
120 128anti-parallel
Strand 8
B
103 114anti-parallel
Strand 9
B
90 93anti-parallel
Strand 10
B
11 13anti-parallel
Strand 11
B
22 23anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
25 26first strand
Strand 2
D
36 37anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
52 54first strand
Strand 2
D
197 200anti-parallel
Strand 3
D
191 194anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
158 159first strand
Strand 2
D
170 171anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
52 54first strand
Strand 2
C
197 200anti-parallel
Strand 3
C
191 194anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
158 159first strand
Strand 2
C
170 171anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il