Analysis of interatomic Contacts of Structural Units in PDB entry:
6TEK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TEK entry

There are 2 chains in PDB entry 6TEK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 16ALA 245
B
 ARG 16ALA 245
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6TEK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 45Right-handed 310
Helix 2
AA2
A
95 104Right-handed alpha
Helix 3
AA3
A
125 129Right-handed 310
Helix 4
AA4
A
141 152Right-handed alpha
Helix 5
AA5
A
166 172Right-handed 310
Helix 6
AA6
A
191 197Right-handed alpha
Helix 7
AA7
A
212 226Right-handed alpha
Helix 8
AA8
A
230 232Right-handed 310
Helix 9
AA9
B
95 104Right-handed alpha
Helix 10
AB1
B
125 129Right-handed 310
Helix 11
AB2
B
138 140Right-handed 310
Helix 12
AB3
B
141 150Right-handed alpha
Helix 13
AB4
B
166 172Right-handed 310
Helix 14
AB5
B
191 197Right-handed alpha
Helix 15
AB6
B
212 226Right-handed alpha
Helix 16
AB7
B
230 232Right-handed 310
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There are 4 sheets in PDB entry 6TEK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 29first strand
Strand 2
A
32 38anti-parallel
Strand 3
A
83 89anti-parallel
Strand 4
A
67 78anti-parallel
Strand 5
A
53 59anti-parallel
Strand 6
A
109 113anti-parallel
Strand 7
A
18 29anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 186first strand
Strand 2
A
158 164parallel
Strand 3
A
132 137parallel
Strand 4
A
205 209parallel
Strand 5
A
234 236parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 29first strand
Strand 2
B
32 38anti-parallel
Strand 3
B
83 89anti-parallel
Strand 4
B
67 77anti-parallel
Strand 5
B
53 59anti-parallel
Strand 6
B
109 113anti-parallel
Strand 7
B
18 29anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
180 186first strand
Strand 2
B
158 164parallel
Strand 3
B
133 137parallel
Strand 4
B
206 209parallel
Strand 5
B
234 236parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il