Analysis of interatomic Contacts of Structural Units in PDB entry:
6TF8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TF8 entry

There are 8 chains in PDB entry 6TF8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2ILE 82
A
 THR 84LEU 251
B
 PRO 2ILE 82
B
 THR 84GLU 248
C
 PRO 2ILE 82
C
 THR 84GLU 248
D
 PRO 2ILE 82
D
 THR 84LEU 251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6TF8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 18Right-handed alpha
Helix 2
AA2
A
32 43Right-handed alpha
Helix 3
AA3
A
65 74Right-handed alpha
Helix 4
AA4
A
92 103Right-handed alpha
Helix 5
AA5
A
115 126Right-handed alpha
Helix 6
AA6
A
135 137Right-handed 310
Helix 7
AA7
A
138 152Right-handed alpha
Helix 8
AA8
A
162 172Right-handed alpha
Helix 9
AA9
A
190 200Right-handed alpha
Helix 10
AB1
A
215 225Right-handed alpha
Helix 11
AB2
A
233 239Right-handed alpha
Helix 12
AB3
A
241 248Right-handed alpha
Helix 13
AB4
B
6 18Right-handed alpha
Helix 14
AB5
B
32 43Right-handed alpha
Helix 15
AB6
B
65 74Right-handed alpha
Helix 16
AB7
B
92 103Right-handed alpha
Helix 17
AB8
B
115 125Right-handed alpha
Helix 18
AB9
B
135 137Right-handed 310
Helix 19
AC1
B
138 152Right-handed alpha
Helix 20
AC2
B
162 172Right-handed alpha
Helix 21
AC3
B
190 200Right-handed alpha
Helix 22
AC4
B
215 225Right-handed alpha
Helix 23
AC5
B
233 239Right-handed alpha
Helix 24
AC6
B
241 248Right-handed alpha
Helix 25
AC7
C
6 18Right-handed alpha
Helix 26
AC8
C
32 43Right-handed alpha
Helix 27
AC9
C
65 74Right-handed alpha
Helix 28
AD1
C
92 103Right-handed alpha
Helix 29
AD2
C
115 126Right-handed alpha
Helix 30
AD3
C
135 137Right-handed 310
Helix 31
AD4
C
138 152Right-handed alpha
Helix 32
AD5
C
162 172Right-handed alpha
Helix 33
AD6
C
190 200Right-handed alpha
Helix 34
AD7
C
215 225Right-handed alpha
Helix 35
AD8
C
233 239Right-handed alpha
Helix 36
AD9
C
241 248Right-handed alpha
Helix 37
AE1
D
6 18Right-handed alpha
Helix 38
AE2
D
32 43Right-handed alpha
Helix 39
AE3
D
65 74Right-handed alpha
Helix 40
AE4
D
92 101Right-handed alpha
Helix 41
AE5
D
115 126Right-handed alpha
Helix 42
AE6
D
135 137Right-handed 310
Helix 43
AE7
D
138 152Right-handed alpha
Helix 44
AE8
D
162 172Right-handed alpha
Helix 45
AE9
D
190 200Right-handed alpha
Helix 46
AF1
D
215 224Right-handed alpha
Helix 47
AF2
D
233 239Right-handed alpha
Helix 48
AF3
D
241 248Right-handed alpha
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There are 4 sheets in PDB entry 6TF8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 52first strand
Strand 2
A
79 83parallel
Strand 3
A
107 110parallel
Strand 4
A
129 133parallel
Strand 5
A
157 160parallel
Strand 6
A
176 179parallel
Strand 7
A
206 211parallel
Strand 8
A
230 232parallel
Strand 9
A
48 52parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 52first strand
Strand 2
B
79 83parallel
Strand 3
B
107 110parallel
Strand 4
B
129 133parallel
Strand 5
B
157 160parallel
Strand 6
B
176 179parallel
Strand 7
B
206 211parallel
Strand 8
B
230 232parallel
Strand 9
B
48 52parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 52first strand
Strand 2
C
79 83parallel
Strand 3
C
107 110parallel
Strand 4
C
129 133parallel
Strand 5
C
157 160parallel
Strand 6
C
176 179parallel
Strand 7
C
206 211parallel
Strand 8
C
230 232parallel
Strand 9
C
48 52parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
48 52first strand
Strand 2
D
79 83parallel
Strand 3
D
107 110parallel
Strand 4
D
129 133parallel
Strand 5
D
157 160parallel
Strand 6
D
176 179parallel
Strand 7
D
206 211parallel
Strand 8
D
230 232parallel
Strand 9
D
48 52parallel
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