Analysis of interatomic Contacts of Structural Units in PDB entry:
6TFJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TFJ entry

There are 4 chains in PDB entry 6TFJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 14	LYS 789
B	PRO 14	LYS 789
C	PRO 14	LYS 789
D	PRO 14	LYS 789

There are 46 helices in PDB entry 6TFJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	23	39	Right-handed alpha
Helix 2	AA2	A	48	78	Right-handed alpha
Helix 3	AA3	A	83	151	Right-handed alpha
Helix 4	AA4	A	160	190	Right-handed alpha
Helix 5	AA5	A	208	219	Right-handed alpha
Helix 6	AA6	A	227	239	Right-handed alpha
Helix 7	AA7	A	248	256	Right-handed alpha
Helix 8	AA8	A	267	296	Right-handed alpha
Helix 9	AA9	A	303	321	Right-handed alpha
Helix 10	AB1	A	396	400	Right-handed alpha
Helix 11	AB2	A	511	517	Right-handed alpha
Helix 12	AB3	B	23	39	Right-handed alpha
Helix 13	AB4	B	54	78	Right-handed alpha
Helix 14	AB5	B	83	116	Right-handed alpha
Helix 15	AB6	B	118	152	Right-handed alpha
Helix 16	AB7	B	160	189	Right-handed alpha
Helix 17	AB8	B	203	219	Right-handed alpha
Helix 18	AB9	B	227	239	Right-handed alpha
Helix 19	AC1	B	248	257	Right-handed alpha
Helix 20	AC2	B	267	296	Right-handed alpha
Helix 21	AC3	B	304	321	Right-handed alpha
Helix 22	AC4	B	396	400	Right-handed alpha
Helix 23	AC5	B	511	517	Right-handed alpha
Helix 24	AC6	C	23	39	Right-handed alpha
Helix 25	AC7	C	48	78	Right-handed alpha
Helix 26	AC8	C	83	151	Right-handed alpha
Helix 27	AC9	C	160	190	Right-handed alpha
Helix 28	AD1	C	208	219	Right-handed alpha
Helix 29	AD2	C	227	239	Right-handed alpha
Helix 30	AD3	C	248	256	Right-handed alpha
Helix 31	AD4	C	267	296	Right-handed alpha
Helix 32	AD5	C	303	321	Right-handed alpha
Helix 33	AD6	C	396	400	Right-handed alpha
Helix 34	AD7	C	511	517	Right-handed alpha
Helix 35	AD8	D	23	39	Right-handed alpha
Helix 36	AD9	D	54	78	Right-handed alpha
Helix 37	AE1	D	83	116	Right-handed alpha
Helix 38	AE2	D	118	152	Right-handed alpha
Helix 39	AE3	D	160	189	Right-handed alpha
Helix 40	AE4	D	203	219	Right-handed alpha
Helix 41	AE5	D	227	239	Right-handed alpha
Helix 42	AE6	D	248	257	Right-handed alpha
Helix 43	AE7	D	267	296	Right-handed alpha
Helix 44	AE8	D	304	321	Right-handed alpha
Helix 45	AE9	D	396	400	Right-handed alpha
Helix 46	AF1	D	511	517	Right-handed alpha

There are 40 sheets in PDB entry 6TFJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	329	331	first strand
Strand 2	A	502	508	anti-parallel
Strand 3	A	491	497	anti-parallel
Strand 4	A	413	416	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	334	338	first strand
Strand 2	A	474	478	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	346	350	first strand
Strand 2	A	421	428	anti-parallel
Strand 3	A	435	443	anti-parallel
Strand 4	A	451	457	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	479	482	first strand
Strand 2	A	356	364	anti-parallel
Strand 3	A	368	376	anti-parallel
Strand 4	A	389	393	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	407	409	first strand
Strand 2	A	465	467	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	573	575	first strand
Strand 2	A	657	660	anti-parallel
Strand 3	A	595	603	anti-parallel
Strand 4	A	630	636	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	581	584	first strand
Strand 2	A	645	651	anti-parallel
Strand 3	A	605	611	anti-parallel
Strand 4	A	617	621	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	596	598	first strand
Strand 2	A	663	665	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	685	687	first strand
Strand 2	A	706	710	anti-parallel
Strand 3	A	766	770	anti-parallel
Strand 4	A	730	734	anti-parallel
Strand 5	A	739	744	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	690	693	first strand
Strand 2	A	696	700	anti-parallel
Strand 3	A	780	784	anti-parallel
Strand 4	A	718	726	anti-parallel
Strand 5	A	751	757	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	329	331	first strand
Strand 2	B	502	508	anti-parallel
Strand 3	B	491	497	anti-parallel
Strand 4	B	413	416	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	334	338	first strand
Strand 2	B	474	478	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	346	350	first strand
Strand 2	B	421	428	anti-parallel
Strand 3	B	435	443	anti-parallel
Strand 4	B	451	457	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	479	482	first strand
Strand 2	B	356	364	anti-parallel
Strand 3	B	368	376	anti-parallel
Strand 4	B	389	393	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	407	409	first strand
Strand 2	B	465	467	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	573	575	first strand
Strand 2	B	657	660	anti-parallel
Strand 3	B	595	603	anti-parallel
Strand 4	B	630	636	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	581	584	first strand
Strand 2	B	645	651	anti-parallel
Strand 3	B	605	611	anti-parallel
Strand 4	B	617	621	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	596	598	first strand
Strand 2	B	663	665	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	685	687	first strand
Strand 2	B	706	710	anti-parallel
Strand 3	B	766	770	anti-parallel
Strand 4	B	730	734	anti-parallel
Strand 5	B	739	744	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	690	693	first strand
Strand 2	B	696	700	anti-parallel
Strand 3	B	780	784	anti-parallel
Strand 4	B	718	726	anti-parallel
Strand 5	B	751	757	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	329	331	first strand
Strand 2	C	502	508	anti-parallel
Strand 3	C	491	497	anti-parallel
Strand 4	C	413	416	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	334	338	first strand
Strand 2	C	474	478	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	346	350	first strand
Strand 2	C	421	428	anti-parallel
Strand 3	C	435	443	anti-parallel
Strand 4	C	451	457	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	479	482	first strand
Strand 2	C	356	364	anti-parallel
Strand 3	C	368	376	anti-parallel
Strand 4	C	389	393	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	407	409	first strand
Strand 2	C	465	467	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	573	575	first strand
Strand 2	C	657	660	anti-parallel
Strand 3	C	595	603	anti-parallel
Strand 4	C	630	636	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	581	584	first strand
Strand 2	C	645	651	anti-parallel
Strand 3	C	605	611	anti-parallel
Strand 4	C	617	621	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	596	598	first strand
Strand 2	C	663	665	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	685	687	first strand
Strand 2	C	706	710	anti-parallel
Strand 3	C	766	770	anti-parallel
Strand 4	C	730	734	anti-parallel
Strand 5	C	739	744	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	690	693	first strand
Strand 2	C	696	700	anti-parallel
Strand 3	C	780	784	anti-parallel
Strand 4	C	718	726	anti-parallel
Strand 5	C	751	757	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	329	331	first strand
Strand 2	D	502	508	anti-parallel
Strand 3	D	491	497	anti-parallel
Strand 4	D	413	416	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	334	338	first strand
Strand 2	D	474	478	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	346	350	first strand
Strand 2	D	421	428	anti-parallel
Strand 3	D	435	443	anti-parallel
Strand 4	D	451	457	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	479	482	first strand
Strand 2	D	356	364	anti-parallel
Strand 3	D	368	376	anti-parallel
Strand 4	D	389	393	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	407	409	first strand
Strand 2	D	465	467	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	573	575	first strand
Strand 2	D	657	660	anti-parallel
Strand 3	D	595	603	anti-parallel
Strand 4	D	630	636	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	581	584	first strand
Strand 2	D	645	651	anti-parallel
Strand 3	D	605	611	anti-parallel
Strand 4	D	617	621	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	596	598	first strand
Strand 2	D	663	665	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	685	687	first strand
Strand 2	D	706	710	anti-parallel
Strand 3	D	766	770	anti-parallel
Strand 4	D	730	734	anti-parallel
Strand 5	D	739	744	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	690	693	first strand
Strand 2	D	696	700	anti-parallel
Strand 3	D	780	784	anti-parallel
Strand 4	D	718	726	anti-parallel
Strand 5	D	751	757	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6TFJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TFJ