Analysis of interatomic Contacts of Structural Units in PDB entry:
6TGB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TGB entry

There are 3 chains in PDB entry 6TGB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ARG 1620
B	ALA 5	CYS 726
D	SER 1196	ARG 1620

There are104 helices in PDB entry 6TGB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	83	109	Right-handed alpha
Helix 2	AA2	A	110	134	Right-handed alpha
Helix 3	AA3	A	137	159	Right-handed alpha
Helix 4	AA4	A	181	206	Right-handed alpha
Helix 5	AA5	A	330	335	Right-handed alpha
Helix 6	AA6	A	498	504	Right-handed alpha
Helix 7	AA7	A	627	639	Right-handed alpha
Helix 8	AA8	A	648	661	Right-handed alpha
Helix 9	AA9	A	662	679	Right-handed alpha
Helix 10	AB1	A	689	701	Right-handed alpha
Helix 11	AB2	A	706	711	Right-handed alpha
Helix 12	AB3	A	711	720	Right-handed alpha
Helix 13	AB4	A	727	736	Right-handed alpha
Helix 14	AB5	A	746	761	Right-handed alpha
Helix 15	AB6	A	764	767	Right-handed 310
Helix 16	AB7	A	768	785	Right-handed alpha
Helix 17	AB8	A	790	797	Right-handed alpha
Helix 18	AB9	A	801	807	Right-handed 310
Helix 19	AC1	A	810	824	Right-handed alpha
Helix 20	AC2	A	830	844	Right-handed alpha
Helix 21	AC3	A	847	868	Right-handed alpha
Helix 22	AC4	A	874	890	Right-handed alpha
Helix 23	AC5	A	897	911	Right-handed alpha
Helix 24	AC6	A	912	921	Right-handed alpha
Helix 25	AC7	A	935	949	Right-handed alpha
Helix 26	AC8	A	950	958	Right-handed alpha
Helix 27	AC9	A	965	982	Right-handed alpha
Helix 28	AD1	A	989	1016	Right-handed alpha
Helix 29	AD2	A	1023	1039	Right-handed alpha
Helix 30	AD3	A	1049	1059	Right-handed alpha
Helix 31	AD4	A	1061	1076	Right-handed alpha
Helix 32	AD5	A	1080	1088	Right-handed alpha
Helix 33	AD6	A	1088	1095	Right-handed alpha
Helix 34	AD7	A	1098	1103	Right-handed alpha
Helix 35	AD8	A	1106	1116	Right-handed alpha
Helix 36	AD9	A	1125	1142	Right-handed alpha
Helix 37	AE1	A	1147	1162	Right-handed alpha
Helix 38	AE2	A	1164	1192	Right-handed alpha
Helix 39	AE3	A	1196	1215	Right-handed alpha
Helix 40	AE4	A	1216	1233	Right-handed alpha
Helix 41	AE5	A	1236	1249	Right-handed alpha
Helix 42	AE6	A	1272	1291	Right-handed alpha
Helix 43	AE7	A	1294	1311	Right-handed alpha
Helix 44	AE8	A	1315	1330	Right-handed alpha
Helix 45	AE9	A	1353	1357	Right-handed 310
Helix 46	AF1	A	1370	1381	Right-handed alpha
Helix 47	AF2	A	1395	1401	Right-handed alpha
Helix 48	AF3	A	1418	1423	Right-handed alpha
Helix 49	AF4	A	1429	1437	Right-handed alpha
Helix 50	AF5	A	1457	1461	Right-handed 310
Helix 51	AF6	A	1493	1517	Right-handed alpha
Helix 52	AF7	A	1523	1535	Right-handed alpha
Helix 53	AF8	A	1542	1548	Right-handed alpha
Helix 54	AF9	A	1552	1559	Right-handed alpha
Helix 55	AG1	A	1562	1591	Right-handed alpha
Helix 56	AG2	A	1594	1618	Right-handed alpha
Helix 57	AG3	B	29	39	Right-handed alpha
Helix 58	AG4	B	45	47	Right-handed 310
Helix 59	AG5	B	80	92	Right-handed alpha
Helix 60	AG6	B	96	111	Right-handed alpha
Helix 61	AG7	B	114	122	Right-handed alpha
Helix 62	AG8	B	124	135	Right-handed alpha
Helix 63	AG9	B	154	169	Right-handed alpha
Helix 64	AH1	B	177	190	Right-handed alpha
Helix 65	AH2	B	194	212	Right-handed alpha
Helix 66	AH3	B	212	221	Right-handed alpha
Helix 67	AH4	B	224	234	Right-handed alpha
Helix 68	AH5	B	236	254	Right-handed alpha
Helix 69	AH6	B	255	269	Right-handed alpha
Helix 70	AH7	B	270	279	Right-handed alpha
Helix 71	AH8	B	287	304	Right-handed alpha
Helix 72	AH9	B	305	311	Right-handed alpha
Helix 73	AI1	B	318	331	Right-handed alpha
Helix 74	AI2	B	366	372	Right-handed 310
Helix 75	AI3	B	377	403	Right-handed alpha
Helix 76	AI4	B	412	429	Right-handed alpha
Helix 77	AI5	B	442	446	Right-handed 310
Helix 78	AI6	B	450	471	Right-handed alpha
Helix 79	AI7	B	476	493	Right-handed alpha
Helix 80	AI8	B	500	509	Right-handed alpha
Helix 81	AI9	B	512	529	Right-handed alpha
Helix 82	AJ1	B	530	559	Right-handed alpha
Helix 83	AJ2	B	618	622	Right-handed 310
Helix 84	AJ3	B	635	641	Right-handed 310
Helix 85	AJ4	B	658	673	Right-handed alpha
Helix 86	AJ5	B	680	701	Right-handed alpha
Helix 87	AJ6	D	1198	1214	Right-handed alpha
Helix 88	AJ7	D	1216	1233	Right-handed alpha
Helix 89	AJ8	D	1236	1249	Right-handed alpha
Helix 90	AJ9	D	1272	1292	Right-handed alpha
Helix 91	AK1	D	1293	1309	Right-handed alpha
Helix 92	AK2	D	1314	1332	Right-handed alpha
Helix 93	AK3	D	1333	1335	Right-handed 310
Helix 94	AK4	D	1353	1357	Right-handed 310
Helix 95	AK5	D	1370	1382	Right-handed alpha
Helix 96	AK6	D	1395	1400	Right-handed alpha
Helix 97	AK7	D	1427	1432	Right-handed alpha
Helix 98	AK8	D	1433	1436	Right-handed 310
Helix 99	AK9	D	1493	1519	Right-handed alpha
Helix 100	AL1	D	1524	1535	Right-handed alpha
Helix 101	AL2	D	1544	1549	Right-handed alpha
Helix 102	AL3	D	1552	1559	Right-handed alpha
Helix 103	AL4	D	1562	1589	Right-handed alpha
Helix 104	AL5	D	1594	1615	Right-handed alpha

There are 16 sheets in PDB entry 6TGB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	57	first strand
Strand 2	A	45	49	anti-parallel
Strand 3	A	35	40	anti-parallel
Strand 4	A	12	15	anti-parallel
Strand 5	A	64	67	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	224	225	first strand
Strand 2	A	383	384	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	239	240	first strand
Strand 2	A	299	300	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	493	495	first strand
Strand 2	A	426	430	anti-parallel
Strand 3	A	602	603	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	448	449	first strand
Strand 2	A	510	511	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	453	454	first strand
Strand 2	A	505	506	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	551	553	first strand
Strand 2	A	594	596	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1447	1448	first strand
Strand 2	A	1463	1471	anti-parallel
Strand 3	A	1481	1492	anti-parallel
Strand 4	A	1359	1365	anti-parallel
Strand 5	A	1341	1348	anti-parallel
Strand 6	A	1405	1413	anti-parallel
Strand 7	A	1442	1444	anti-parallel
Strand 8	A	1463	1471	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	7	8	first strand
Strand 2	B	24	25	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	12	first strand
Strand 2	B	20	21	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	53	first strand
Strand 2	B	75	79	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	577	579	first strand
Strand 2	B	585	588	anti-parallel
Strand 3	B	607	609	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	615	616	first strand
Strand 2	B	644	645	anti-parallel
Strand 3	B	651	652	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1360	1365	first strand
Strand 2	D	1341	1348	anti-parallel
Strand 3	D	1405	1410	anti-parallel
Strand 4	D	1386	1387	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1412	1413	first strand
Strand 2	D	1442	1444	anti-parallel
Strand 3	D	1463	1470	anti-parallel
Strand 4	D	1447	1448	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1412	1413	first strand
Strand 2	D	1442	1444	anti-parallel
Strand 3	D	1463	1470	anti-parallel
Strand 4	D	1486	1492	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6TGB

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TGB