Analysis of interatomic Contacts of Structural Units in PDB entry:
6TGH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TGH entry

There are 4 chains in PDB entry 6TGH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 7	TYR 416
C	ASP 7	TYR 416
B	ASP 7	TYR 416
D	ASP 7	TYR 416

There are 77 helices in PDB entry 6TGH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	7	11	Right-handed 310
Helix 2	AA2	A	12	26	Right-handed alpha
Helix 3	AA3	A	40	48	Right-handed alpha
Helix 4	AA4	A	49	54	Right-handed 310
Helix 5	AA5	A	70	87	Right-handed alpha
Helix 6	AA6	A	97	110	Right-handed alpha
Helix 7	AA7	A	126	130	Right-handed 310
Helix 8	AA8	A	134	140	Right-handed alpha
Helix 9	AA9	A	155	167	Right-handed alpha
Helix 10	AB1	A	183	194	Right-handed alpha
Helix 11	AB2	A	205	211	Right-handed alpha
Helix 12	AB3	A	244	256	Right-handed alpha
Helix 13	AB4	A	264	279	Right-handed alpha
Helix 14	AB5	A	280	304	Right-handed alpha
Helix 15	AB6	A	309	313	Right-handed 310
Helix 16	AB7	A	329	339	Right-handed alpha
Helix 17	AB8	A	366	372	Right-handed alpha
Helix 18	AB9	A	375	392	Right-handed alpha
Helix 19	AC1	A	395	413	Right-handed alpha
Helix 20	AC2	C	8	12	Right-handed alpha
Helix 21	AC3	C	12	17	Right-handed alpha
Helix 22	AC4	C	17	26	Right-handed alpha
Helix 23	AC5	C	40	47	Right-handed alpha
Helix 24	AC6	C	48	54	Right-handed 310
Helix 25	AC7	C	68	87	Right-handed alpha
Helix 26	AC8	C	97	110	Right-handed alpha
Helix 27	AC9	C	126	130	Right-handed 310
Helix 28	AD1	C	134	140	Right-handed alpha
Helix 29	AD2	C	155	167	Right-handed alpha
Helix 30	AD3	C	183	194	Right-handed alpha
Helix 31	AD4	C	205	211	Right-handed alpha
Helix 32	AD5	C	244	256	Right-handed alpha
Helix 33	AD6	C	264	279	Right-handed alpha
Helix 34	AD7	C	281	304	Right-handed alpha
Helix 35	AD8	C	309	313	Right-handed 310
Helix 36	AD9	C	329	339	Right-handed alpha
Helix 37	AE1	C	366	372	Right-handed alpha
Helix 38	AE2	C	375	392	Right-handed alpha
Helix 39	AE3	C	395	413	Right-handed alpha
Helix 40	AE4	B	12	29	Right-handed alpha
Helix 41	AE5	B	40	48	Right-handed alpha
Helix 42	AE6	B	49	54	Right-handed 310
Helix 43	AE7	B	68	87	Right-handed alpha
Helix 44	AE8	B	97	110	Right-handed alpha
Helix 45	AE9	B	121	124	Right-handed 310
Helix 46	AF1	B	126	130	Right-handed 310
Helix 47	AF2	B	134	140	Right-handed alpha
Helix 48	AF3	B	155	167	Right-handed alpha
Helix 49	AF4	B	183	195	Right-handed alpha
Helix 50	AF5	B	205	211	Right-handed alpha
Helix 51	AF6	B	244	256	Right-handed alpha
Helix 52	AF7	B	264	280	Right-handed alpha
Helix 53	AF8	B	280	304	Right-handed alpha
Helix 54	AF9	B	311	313	Right-handed 310
Helix 55	AG1	B	329	340	Right-handed alpha
Helix 56	AG2	B	366	372	Right-handed alpha
Helix 57	AG3	B	375	392	Right-handed alpha
Helix 58	AG4	B	395	413	Right-handed alpha
Helix 59	AG5	D	7	11	Right-handed 310
Helix 60	AG6	D	12	28	Right-handed alpha
Helix 61	AG7	D	40	48	Right-handed alpha
Helix 62	AG8	D	49	54	Right-handed 310
Helix 63	AG9	D	68	87	Right-handed alpha
Helix 64	AH1	D	97	110	Right-handed alpha
Helix 65	AH2	D	126	130	Right-handed 310
Helix 66	AH3	D	134	140	Right-handed alpha
Helix 67	AH4	D	155	167	Right-handed alpha
Helix 68	AH5	D	183	194	Right-handed alpha
Helix 69	AH6	D	205	212	Right-handed alpha
Helix 70	AH7	D	244	256	Right-handed alpha
Helix 71	AH8	D	264	278	Right-handed alpha
Helix 72	AH9	D	280	304	Right-handed alpha
Helix 73	AI1	D	311	313	Right-handed 310
Helix 74	AI2	D	329	340	Right-handed alpha
Helix 75	AI3	D	366	372	Right-handed alpha
Helix 76	AI4	D	375	392	Right-handed alpha
Helix 77	AI5	D	395	413	Right-handed alpha

There are 16 sheets in PDB entry 6TGH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	31	first strand
Strand 2	A	342	343	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	59	first strand
Strand 2	A	62	63	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	92	first strand
Strand 2	A	238	242	anti-parallel
Strand 3	A	223	227	anti-parallel
Strand 4	A	197	201	parallel
Strand 5	A	170	173	parallel
Strand 6	A	115	119	parallel
Strand 7	A	141	145	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	318	322	first strand
Strand 2	A	361	365	anti-parallel
Strand 3	A	345	346	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	30	31	first strand
Strand 2	C	342	343	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	59	first strand
Strand 2	C	62	63	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	90	92	first strand
Strand 2	C	238	242	anti-parallel
Strand 3	C	223	227	anti-parallel
Strand 4	C	197	201	parallel
Strand 5	C	170	173	parallel
Strand 6	C	115	119	parallel
Strand 7	C	141	145	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	318	322	first strand
Strand 2	C	361	365	anti-parallel
Strand 3	C	345	346	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	30	31	first strand
Strand 2	B	342	343	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	59	first strand
Strand 2	B	62	63	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	92	first strand
Strand 2	B	238	242	anti-parallel
Strand 3	B	223	227	anti-parallel
Strand 4	B	197	201	parallel
Strand 5	B	170	173	parallel
Strand 6	B	115	119	parallel
Strand 7	B	141	145	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	308	309	first strand
Strand 2	B	318	322	anti-parallel
Strand 3	B	361	365	anti-parallel
Strand 4	B	345	347	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	30	31	first strand
Strand 2	D	342	343	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	59	first strand
Strand 2	D	62	63	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	90	92	first strand
Strand 2	D	238	242	anti-parallel
Strand 3	D	223	227	anti-parallel
Strand 4	D	197	201	parallel
Strand 5	D	170	173	parallel
Strand 6	D	115	119	parallel
Strand 7	D	141	145	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	308	309	first strand
Strand 2	D	318	322	anti-parallel
Strand 3	D	361	365	anti-parallel
Strand 4	D	345	347	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6TGH

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TGH