Analysis of interatomic Contacts of Structural Units in PDB entry:
6TGK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TGK entry

There is 1 chain in PDB entry 6TGK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
LEU 742ALA 846
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6TGK. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
C
743 751Right-handed alpha
Helix 2
AA2
C
761 773Right-handed alpha
Helix 3
AA3
C
775 788Right-handed alpha
Helix 4
AA4
C
796 800Right-handed 310
Helix 5
AA5
C
831 845Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6TGK.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
752 754first strand
Strand 2
C
803 805parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il