Analysis of interatomic Contacts of Structural Units in PDB entry:
6TH0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TH0 entry

There are 2 chains in PDB entry 6TH0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 24GLY 199
B
 THR 24ILE 197
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6TH0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 33Right-handed 310
Helix 2
AA2
A
34 46Right-handed alpha
Helix 3
AA3
A
51 61Right-handed alpha
Helix 4
AA4
A
77 80Right-handed 310
Helix 5
AA5
A
94 96Right-handed 310
Helix 6
AA6
A
98 102Right-handed 310
Helix 7
AA7
A
123 126Right-handed 310
Helix 8
AA8
A
129 143Right-handed alpha
Helix 9
AA9
A
159 169Right-handed alpha
Helix 10
AB1
B
31 33Right-handed 310
Helix 11
AB2
B
34 46Right-handed alpha
Helix 12
AB3
B
51 61Right-handed alpha
Helix 13
AB4
B
75 80Right-handed alpha
Helix 14
AB5
B
94 96Right-handed 310
Helix 15
AB6
B
98 102Right-handed 310
Helix 16
AB7
B
123 126Right-handed 310
Helix 17
AB8
B
129 145Right-handed alpha
Helix 18
AB9
B
159 169Right-handed alpha
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There are 2 sheets in PDB entry 6TH0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 29first strand
Strand 2
A
64 71anti-parallel
Strand 3
A
82 92anti-parallel
Strand 4
A
112 121anti-parallel
Strand 5
A
148 156parallel
Strand 6
A
186 196anti-parallel
Strand 7
A
172 183anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 29first strand
Strand 2
B
67 71anti-parallel
Strand 3
B
82 92anti-parallel
Strand 4
B
112 121anti-parallel
Strand 5
B
148 156parallel
Strand 6
B
188 196anti-parallel
Strand 7
B
172 181anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il